Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02850 ATGGTTAATGGGGCACACAATCTTCTAGAGCCAAACGTGCCTCAATTGCCTAAAACTGAGTTGCCACCTTTGCCAAAGCCTATCTTACCTGAAGTCCCTAAATTACCAAAGCCAGAGTTGCCTCAGATCCCTGAATTGTCAAAACCAGATCTACCTAAACTACCTAGTGGAAAAGGTTCAGGTTTTATGGGGTCCAATAACCAAATGCAACAAGAAATATCAGAATTGCGAGCAAGTTTGGAAAGAGAAACACATAAGAGACATGAACTTCAGAATGCTATTTCCTTAGTCTTCCCAGAGCTTGCTGCAATTCTTAACCAAATGAATAACAAAGAAAGAGAACAACCTTCTTCTTCTGGAGCCACAACAGGTCCTTCATATAACTCCCCCACACTTGGTATGGAGGAAACTTGCAACTCTCCATCACTATTGAAGAAGTTAGCAAATGAAACTGGTTTGGACTTCAGTGATCAAATTGCCATATTGGACATGAAGTATCAGCAGGGTGAAGCAGTTGTTAGTTCTTCATTGGCTTGTCTTACCAGTAAGAAATCGGGTGACCAATGTTCAGCATCTGCATCAGCATTTGCACAGTGTCAATTACTCAATATCAGTTACTGCCCTCCAACAGAAAATATTCCAAAAGCTAAGAGTTTGGTAGTAGTGGTGTATAACCCACTTGAATGGAGTCGTAGTGATATTGTCATAATACCAGTTACTAGGCTTTACAAAGACACAGACCATGCTGAAATCAAATTCACCATTGGTCCAATTCCAACTGATGATGGAGTTGGAAAAGAGGTGATCACACAAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCTAATAGAAGAGATTTTCTAAAACGGGTCAGCTTCTTTAGACAATTTGTTGGATCTGTTAATAAAGTTGATTATTTGACATTAAGGCATGGATTTATCACGGCACATCTAGCACCAGGAAATGATGCACAATTTGATTTCCAAAAATATATCAACAGATCACTTGAAGAGGATTTTAAAGTTGTGGTAGGAATCAGAAATCATTTTAGAATTGATAATGATATTGAGTTTACTTCTGTCTCAGGCTTGGCTACTTGCCTTCCTCAACTAAAAAAAATTGGTGAAGTTTGCTGA 1149 0.3864 MVNGAHNLLEPNVPQLPKTELPPLPKPILPEVPKLPKPELPQIPELSKPDLPKLPSGKGSGFMGSNNQMQQEISELRASLERETHKRHELQNAISLVFPELAAILNQMNNKEREQPSSSGATTGPSYNSPTLGMEETCNSPSLLKKLANETGLDFSDQIAILDMKYQQGEAVVSSSLACLTSKKSGDQCSASASAFAQCQLLNISYCPPTENIPKAKSLVVVVYNPLEWSRSDIVIIPVTRLYKDTDHAEIKFTIGPIPTDDGVGKEVITQMTANMATNKEFYTDSNRRDFLKRVSFFRQFVGSVNKVDYLTLRHGFITAHLAPGNDAQFDFQKYINRSLEEDFKVVVGIRNHFRIDNDIEFTSVSGLATCLPQLKKIGEVC* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02850 382 Pfam Mlo family 287 352 IPR004326 GO:0006952|GO:0016020
Rops11g02850 382 Gene3D - 216 309 - -
Rops11g02850 382 MobiDBLite consensus disorder prediction 1 65 - -
Rops11g02850 382 Coils Coil 66 93 - -
Rops11g02850 382 MobiDBLite consensus disorder prediction 16 45 - -
Rops11g02850 382 Pfam Glycosyl hydrolases family 38 C-terminal domain 231 295 IPR011682 GO:0004559|GO:0006013
Rops11g02850 382 SUPERFAMILY Galactose mutarotase-like 194 242 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops11g02850 382 SUPERFAMILY Galactose mutarotase-like 239 302 IPR011013 GO:0003824|GO:0005975|GO:0030246
Rops11g02850 382 PANTHER ALPHA-MANNOSIDASE 239 294 - -
Rops11g02850 382 MobiDBLite consensus disorder prediction 110 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02850 Rops-Chr11 49514646 49529799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02850 295 350 MLO family AT1G61560 78.571 4.03e-23 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02850 K01191 K08472 gmx:100775419 112.464