Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02818 ATGATGCAGTTGGGATCTTTGGCTAAATCTCAAGATCCAGCCACTCTTCCTGACAGTGGATCACAGCAGTCTAATCCTTCTCAAATTGGATCTCAGCCCACTTTCAAAGAATGGCATCCACTACCTGCTAAGAGTCAGCCAGCACTTGCTCATCTCATAAAGCGTTGTTGGGCAGCAAACCCTACTAAGAAGCCAGATTTCAAGGCGTATTTGGAATATGAATCTGCCTGCCTGAAGCACGAAGAAGATGATTTCTTTGGAATTTTGTCTGATATTATTGAATTGGAGTATCCTGGTATGCCTACTAAAAAGTTAGTTGTGTTTAAGTGTGATTGGTTTGATAACACTCCAAATCGTGGGACAAGAGTAGACAAAAAATATGGAATTGCTGAAGTCAAGGAATCAGGAAGATATAAAAATTATGATCCATTCATATTTGCACAACAAGCTGAGCAAGTCTACTACACGCCATATCCAACCGGACATCACGGTTGGTTGGCTGTCATTAAGACAAAGGCACGTAGTGCGATCACTAATAACTTAGTCAATCAGGTTGAGAATGAAATTCCATACCAAGATGTGCCTGAAGTTCACGACCTCCATGTAATGTTGCATATTGATGCAGATGTTTATGAAGATAACCTTGTTGATGTTACGGGTGACAGTGAGCAAGTTGATATTAGTTTACTCAATATACCCAATATTGGTGACAACAATGAGAGTGAAAGTGATAATGAGAGTGAAAGTGACAATGAGAGTGAAAGTTTTGGTTTCATGTTCATTGCACTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGATTATTGCTATTCTAAATGATGGAACAATCATGACAATTTCAAAAGATAGGGTTAAGCCATCTCCCATGCCTGATAGCTGGAAATTGAAAGAAATATTTGCTACTGGGATTGTTCTTGGAAGTTACTTAGCATTGATGACTGACAAATTTGGAGATAGACACCTGACTCAAAATGAAAAGATGTCTGCTCTGTATCTACAAGTCAGTATAGTTAGCCAGGCTCTGATTTTTGTAACCCGTTCCCGTAGCTGGTCCTTTGTTGAACGCCCTGGATTGCTATTAGTCGTTGCTTTCATTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCCAACTGGGGTTTTGCAAAAGTCAAAGGAATTGGTTGGGGCTGGGCAGGAGTCAATCCAGCAGAAATTTGCAAGAGAAGAGCTGAAGTTGCAAGGCTTCGTGAGCTTCACACACTTAAGGGACATGTTGAGTCTGTAGTGAAGCTGAAAGGTCTGGACATTGATACAATCCAGCAGTGCTACACAGTGTGA 1350 0.4059 MMQLGSLAKSQDPATLPDSGSQQSNPSQIGSQPTFKEWHPLPAKSQPALAHLIKRCWAANPTKKPDFKAYLEYESACLKHEEDDFFGILSDIIELEYPGMPTKKLVVFKCDWFDNTPNRGTRVDKKYGIAEVKESGRYKNYDPFIFAQQAEQVYYTPYPTGHHGWLAVIKTKARSAITNNLVNQVENEIPYQDVPEVHDLHVMLHIDADVYEDNLVDVTGDSEQVDISLLNIPNIGDNNESESDNESESDNESESFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGSYLALMTDKFGDRHLTQNEKMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVVAFIIAQLIATIIAVYANWGFAKVKGIGWGWAGVNPAEICKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQCYTV* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02818 449 Gene3D - 408 449 - -
Rops11g02818 449 MobiDBLite consensus disorder prediction 1 37 - -
Rops11g02818 449 MobiDBLite consensus disorder prediction 232 251 - -
Rops11g02818 449 Gene3D - 249 407 - -
Rops11g02818 449 MobiDBLite consensus disorder prediction 1 34 - -
Rops11g02818 449 SUPERFAMILY Calcium ATPase, transmembrane domain M 258 403 IPR023298 -
Rops11g02818 449 PANTHER CALCIUM-TRANSPORTING ATPASE 257 397 - -
Rops11g02818 449 Pfam Domain of unknown function (DUF4216) 93 168 IPR025312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02818 Rops-Chr11 48776990 48791786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02818 407 449 Primary Pumps ATPases AT2G18960 81.395 9.44e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02818 K01535 - gmx:100816905 272.322