Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02810 ATGGACCTTTTCTTTGCTACATTCCTCTTCCTCATCCCAATTCTCCTTCTATTTAGGAGATCATCATCCAAAAGGGTCCCTCCAGGTTCTCTTGGAGTACCCCTTATTGGTCAAAGCCTTGGCTTTCTTCGAGCCTTACGTGCCAACACTGCAGAAAAGTGGGTGGAAGAAAGAGTCAAGAAGTATGGTCCAGTTTCAAAGCTTAGCCTCTTTGGAAAACCAACAATGTACATCTATGGACAGGGTGCAAATAAGTTTATATTCACTAATGATGATCACAAGCGGATCAGAAGTGCACTTGTCAGGTTCTGGAAGCCAGAGTCCTTGAAGCAATACGTGGGGAAAGTGGATGAAGAAGTTAAGAGACACATAGAAATGCATTGGCAGGAAAAACAGAAGGTCAAGGTGTTGCCTCTGATGAAGACACTCAATTTCAACATAATTTGTTCACTTCTGTTTGGTATTGAGCAAGGAAAACAAAGAGATCAATTTTTGGCTTCCTTTCAAGTGATGATAAAAGGAGTGTGGTCAGTTCCTGTGAATATGCCCTTCACACACTACAGCCGCAGCCTTAGAGAAAGTGCAAGGATGCAGCACATGCTGAAGGAGGTTGTACACAAGAAGAAGACTGAACTCGAGAAAAATGAGGCTTCTCCTCACCAAGACTTGATCACATGCTTGCTTTCTTTGCTTGATGAAAACGACAAACAATTGATCACTGAGAAGGAAATCATAGAAAATGCCATGCTTGTCATGGTTGCTGGACATGAAACTTCATCTGCTCTAATCACTTTCATTATCCGAGTCTTGGCTAGTGATCCAACTGTTTATGAAGCAGTTCTTCAAGAACAAGAAGAGATAGCAAAAAGCAAGCTCTCAGGGGAGTCTCTGACATGGGAAGACCTTGCTAAGATGAAGTATACCTGGAGAGTAGCAATGGAAACTCTCAGGATGTTTCCTCCTGTCTTTGGTGGCTTTAGAAAGGCTTTGACAGATATTGAATACGGTGGATACCTTATACCCAAAGGGTGGCAAATCTTCTGGGTTACAGCAATGACTCACATGGACAATAGCATATTCCCAGAACCATCAAAGTTTGAGCCAAGTAGATTTGAAAACCAAGCATCTATCCCTCCCTACTGCTTCATCCCATTTGGTGCAGGAGCAAGAATATGTCCAGGATATGATCTTGCTAAGACTGAAACTCTTGTGACAATCCAATATCTTGAGGCTGTGAAGTACCAGCCTGGACATGATCTGGGTCGGGCTGTGAAGAAGAAGGCTGGACATGATGTGGGTCGGGCTGTGAAGTACCAGTCTGGTAAAGATCTGGGCGGGGCTGGGAAGTACCGGCTTCACTACCGGGCATGGGATATGGCTGCCAGCCGAAAGGAAAAGGCATCGTAG 1407 0.4421 MDLFFATFLFLIPILLLFRRSSSKRVPPGSLGVPLIGQSLGFLRALRANTAEKWVEERVKKYGPVSKLSLFGKPTMYIYGQGANKFIFTNDDHKRIRSALVRFWKPESLKQYVGKVDEEVKRHIEMHWQEKQKVKVLPLMKTLNFNIICSLLFGIEQGKQRDQFLASFQVMIKGVWSVPVNMPFTHYSRSLRESARMQHMLKEVVHKKKTELEKNEASPHQDLITCLLSLLDENDKQLITEKEIIENAMLVMVAGHETSSALITFIIRVLASDPTVYEAVLQEQEEIAKSKLSGESLTWEDLAKMKYTWRVAMETLRMFPPVFGGFRKALTDIEYGGYLIPKGWQIFWVTAMTHMDNSIFPEPSKFEPSRFENQASIPPYCFIPFGAGARICPGYDLAKTETLVTIQYLEAVKYQPGHDLGRAVKKKAGHDVGRAVKYQSGKDLGGAGKYRLHYRAWDMAASRKEKAS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02810 468 Gene3D Cytochrome P450 18 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 Pfam Cytochrome P450 92 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PANTHER CYTOCHROME P450 26 24 410 - -
Rops11g02810 468 CDD CYP90-like 58 409 - -
Rops11g02810 468 PRINTS E-class P450 group I signature 382 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PRINTS E-class P450 group I signature 349 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 FunFam Taxadiene 5-alpha hydroxylase 89 415 - -
Rops11g02810 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 385 394 IPR017972 GO:0005506|GO:0016705
Rops11g02810 468 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PRINTS P450 superfamily signature 254 271 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PRINTS P450 superfamily signature 310 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 PRINTS P450 superfamily signature 383 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02810 468 SUPERFAMILY Cytochrome P450 19 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02810 Rops-Chr11 48687903 48693737 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02810 6 418 Cytochrome P450 AT5G45340 31.448 2.00e-69 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02810 - - lja:Lj2g3v3149370.1 621.698