Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02777 ATGGAAATTCCGATTCCACCCCCACCCTTACCCCTACCCCTACCCCCTTTTGTCCTATTTTCGGAGGCCGAAGAATCTGATGCCAAAGAGTATGTGCATATACGCATTCAGCAAAGGAATGGAAAAAGGAGCCTGACTACAGTTCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAAATCCTCAAGGACCTCAAGAAAGAGTTCTGTTGCAACGGGGTTGTTGTGCACGACAAGGAACTCGGTAAAACAATCCAACTCCAAGGTGATCAGCGCAAGAAAGTTTCTCAGTTCCTTGCTCAGGCTGGTCTTGTGAGGAAGGACCAGATCAAGATTCATGGTTTCTAA 345 0.4696 MEIPIPPPPLPLPLPPFVLFSEAEESDAKEYVHIRIQQRNGKRSLTTVQGLKKEFSYEKILKDLKKEFCCNGVVVHDKELGKTIQLQGDQRKKVSQFLAQAGLVRKDQIKIHGF* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02777 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Rops11g02777 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Rops11g02777 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 21 114 - -
Rops11g02777 114 NCBIfam translation initiation factor SUI1 25 114 IPR005874 GO:0003743
Rops11g02777 114 Pfam Translation initiation factor SUI1 29 102 IPR001950 GO:0003743|GO:0006413
Rops11g02777 114 Gene3D - 16 114 - -
Rops11g02777 114 FunFam Eukaryotic translation initiation factor SUI1 13 114 - -
Rops11g02777 114 SUPERFAMILY eIF1-like 20 114 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02777 Rops-Chr11 47824420 47824764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02777 1 114 Eukaryotic Initiation Factors Gene Family AT5G54940 70.085 2.90e-53 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02777 K03113 - gmx:100791423 172.17