Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02776 ATGAAAAGTACTGTTACGGATAACAGACAAGATATCGAAAGGTTTGTTGATTGTCTTTTGACTTGTCTCGAAGCCTTCTTCTCTAACAGTTGCTTTCTGAGTTCGGTGTTACTAAGTTTTCGTCAAGCAAGGTACATGGTTGAATTGGAAAATCAGATCCCAACCCCTTTTGACCCATTTGCTGAGGCCATAGAATCTGATGCCCCCGGAGCCAAAGAGTATGTGCATATTCGCATTCAGCAAAGGAATGGAAAAAAGAGCCTGACTACAGTTCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAAATCCTCAAGGACCTCAAGAAAGAGTTCTGTTGCAACGGGAATGTTGTGCAGGACAAGGAGCTTGGTAAAATAGTCCAACTTCAAGGTGATCAGCGCAAGAAAGTTTCTCAGTTCCTTGTTCAGGCTGGTCTTGTGAGGAAGGACCAGATCAAGATTCATGGTTTCTAA 474 0.4304 MKSTVTDNRQDIERFVDCLLTCLEAFFSNSCFLSSVLLSFRQARYMVELENQIPTPFDPFAEAIESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVQDKELGKIVQLQGDQRKKVSQFLVQAGLVRKDQIKIHGF* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02776 157 FunFam Eukaryotic translation initiation factor SUI1 47 157 - -
Rops11g02776 157 CDD eIF1_SUI1 73 156 IPR005874 GO:0003743
Rops11g02776 157 Gene3D - 39 157 - -
Rops11g02776 157 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 51 157 - -
Rops11g02776 157 Pfam Translation initiation factor SUI1 72 145 IPR001950 GO:0003743|GO:0006413
Rops11g02776 157 NCBIfam translation initiation factor SUI1 52 157 IPR005874 GO:0003743
Rops11g02776 157 ProSiteProfiles Translation initiation factor SUI1 family profile. 75 145 IPR001950 GO:0003743|GO:0006413
Rops11g02776 157 SUPERFAMILY eIF1-like 45 157 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02776 Rops-Chr11 47813573 47815990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02776 46 157 Eukaryotic Initiation Factors Gene Family AT5G54940 84.821 1.00e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02776 K03113 - gmx:100787664 216.083