Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02771 ATGCTTTCCTCCCCTCTCTCGAATGGGATTCCTTCAAAACCTCACCTTTCTCACAATAATCCCCTTTTTCCTTTCCATCCCCAATTTCACCAAACCCATTTCCCTCCGCCAAAGAAGAAGAACCACACTTCGATCCATTGCGGAATTCGAGAGCTCCGAGAACGAATCCAAACGGTGAAGAACACACAGAAAATCACCGAAGCAATGAAGCTTGTAGCCGCCGCTAGAGTCCGCAAAGCACAAGAAACCGTAGTTAATGGAAGACCCTTTTCAGAGACACTCGCTGAAATGTTGCACGACATCAACGAAAATCTCCGAAACGACGACGTTGAGGTTCCTTTGACCAACGTTAGACCCGTGAAAAGTGTTGCCCTTGTTGTCATCACTGGTGACCGTGGCCTTTGCGGCGGTTTCAACAACGCAGTGTTGAAAAAAGCTGAAATCCGAATTGAGGAATTGAAGAAACTCGGTTTGGAATGTGTTGTTATCAGTGTTGGCAAAAAGGGTAACTCATTTTTCATTAAAAGACCCTTTTTTCATGTTGATAGGTTCATTGAAGGTGGTGGTTTTCCTACTACAAAACAAGCTCAGGCTATTGCTGATGATGTTTTTTCATTGTTTATTAGTGAGGAAGTTGATAAGGTTGAGCTTGTGTATACTAAGTTTGTGTCTTTGGTTAAGTTTGATCCTGTGATTCAAACGTTGTTGCCTTTGTCAAGAAAAGGTGAGGTTTGTGATGTGAATGGGAATTGTGTTGATGCGATGGGGGATGAGTTTTTCAGGTTGACTTCTAAGGATGGGAAGTTAGCTGTAGAGAGAGATGTTGTGAGGAAGAAGAAAAAGAGAGATGGGTGTGTTCCCCTTATGCAATTTGAGCAAGACCCTGTTCAGATTCTTGATGCAATGATGCCTCTTTATTTGAATAGTCAGATTTTGAGGGGCTTGCAAGAATCAATGGCTAGTGAGGTTGCTGCAAGGATGGGTGCCATGTCTAATGCCACTGATAATGCAATTGAGTTGAAGAAGAATCTTTCAATTGCTTATAATAGGGAAAGGCAGGCTAAGATCACAGGGGAGATATTGGAGATTGTGGCTGGAGCTGAGGCATTAACACCAATTGATTGA 1125 0.4284 MLSSPLSNGIPSKPHLSHNNPLFPFHPQFHQTHFPPPKKKNHTSIHCGIRELRERIQTVKNTQKITEAMKLVAAARVRKAQETVVNGRPFSETLAEMLHDINENLRNDDVEVPLTNVRPVKSVALVVITGDRGLCGGFNNAVLKKAEIRIEELKKLGLECVVISVGKKGNSFFIKRPFFHVDRFIEGGGFPTTKQAQAIADDVFSLFISEEVDKVELVYTKFVSLVKFDPVIQTLLPLSRKGEVCDVNGNCVDAMGDEFFRLTSKDGKLAVERDVVRKKKKRDGCVPLMQFEQDPVQILDAMMPLYLNSQILRGLQESMASEVAARMGAMSNATDNAIELKKNLSIAYNRERQAKITGEILEIVAGAEALTPID* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02771 374 NCBIfam ATP synthase F1 subunit gamma 49 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 MobiDBLite consensus disorder prediction 1 15 - -
Rops11g02771 374 Gene3D - 117 239 - -
Rops11g02771 374 FunFam ATP synthase gamma chain, chloroplastic 265 370 - -
Rops11g02771 374 PANTHER ATP SYNTHASE GAMMA CHAIN 33 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 CDD F1-ATPase_gamma 49 367 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 ProSitePatterns ATP synthase gamma subunit signature. 356 369 IPR023632 -
Rops11g02771 374 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 48 370 IPR035968 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 Pfam ATP synthase 49 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 MobiDBLite consensus disorder prediction 1 26 - -
Rops11g02771 374 FunFam ATP synthase gamma chain 113 239 - -
Rops11g02771 374 Hamap ATP synthase gamma chain [atpG]. 46 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 FunFam ATP synthase gamma chain, chloroplastic 47 114 - -
Rops11g02771 374 PRINTS ATP synthase gamma subunit signature 317 336 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 PRINTS ATP synthase gamma subunit signature 120 139 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 PRINTS ATP synthase gamma subunit signature 213 230 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 PRINTS ATP synthase gamma subunit signature 348 369 IPR000131 GO:0015986|GO:0045261|GO:0046933
Rops11g02771 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 47 116 - -
Rops11g02771 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 271 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02771 Rops-Chr11 47781736 47783220 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02771 23 370 Primary Pumps ATPases AT1G15700 71.023 2.92e-178 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02771 K02115 - qsu:112000322 502.286