Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02757 ATGAAGAAGATGAGGGTTTGGTGCAATCGGTTGGTGGTGTTCTGCATTGTCTGTTGCCTCAGTTTTTCTCTGCAGCTCACAAGGGTTTCTTCAACCTCACCTACTCTACACACTGACCATGATCGTATAGATTCAGATGCTGGAAGAACTCTGGAGCAGGAGCAGGGTGGTAATCATCAAATACATTGCTCTAGAGAAAGAAGTAGAGCAGCTTGGAAAATCATTCAAGAGTATTTGATGCCCTTTGTGGAGAAAGAAAAATATCATATCTCAAGAAGGTGTAGGCTTCACCCTGACAATGATATATACCGAGATCAGGAACAACATAAATTTCATATAGATATAAATGAATGGCAGTGTGGGTACTGTAAGAAAAGTTTCTATGAAGAGAAACATCTTGATCAGCATTTCGACAACAGACACTCCAATTTGCTTAATGCGAATGAAAGCTGGTGCTTAGCAGATGTTTGCAGTGCACTGCACTGTGACCTTGAAATGAATTCTTGGTCAAAAAAATCAAAGTGCAATCCTGCTGCTGCTGCAAGAAATAAACATCTATGTGAGAGCTTAGCCGATAGTTGTTTTCCGGTTAACGAGGGTCCTGCAGCAAGCCGACTTCATGAATTCTTATTGCACCAATTCTGCGATGCACACAGCTGCACTGGAAGTAGGAAACCTTTCTCCAGAGGGCGCAGGAAAAAGACAAGTGTGTTCTACCTCGTTGCCTCCAGTTTTCTTGTGATGCTGCTGCTACTTTACTATCTCTACATTTACTTATATCAGAGAGGGATGAGAAGGGAAACTCAAATGCTGAAGCGTATCTCACAAACAAGCCGAAAGAAAAAGCCATCTTAA 855 0.4187 MKKMRVWCNRLVVFCIVCCLSFSLQLTRVSSTSPTLHTDHDRIDSDAGRTLEQEQGGNHQIHCSRERSRAAWKIIQEYLMPFVEKEKYHISRRCRLHPDNDIYRDQEQHKFHIDINEWQCGYCKKSFYEEKHLDQHFDNRHSNLLNANESWCLADVCSALHCDLEMNSWSKKSKCNPAAAARNKHLCESLADSCFPVNEGPAASRLHEFLLHQFCDAHSCTGSRKPFSRGRRKKTSVFYLVASSFLVMLLLLYYLYIYLYQRGMRRETQMLKRISQTSRKKKPS* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02757 284 ProSitePatterns Zinc finger C2H2 type domain signature. 120 141 IPR013087 -
Rops11g02757 284 PANTHER ZINC FINGER PROTEIN-RELATED 12 283 - -
Rops11g02757 284 ProSiteProfiles Zinc finger C2H2 type domain profile. 118 143 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02757 Rops-Chr11 47568141 47573215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02757 52 284 C2H2 Transcription Factor Family AT5G63280 62.232 8.61e-105 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Rops11g02757 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02757 - - lang:109338698 470.7