Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02748 ATGTCAAATTTGCCCCAATCGCTGTCTATGAACGCTGCATTTGGCGGCGGTGGCGGTGGTCCTCCTCCTTCTCCCGGTGCTTCTGCTGCCACCAAAGATCGGAAAATGGCGTCGGCGGAGCAACTTGTTCTCGAACTCAGTAACCCTGACCTCCGTGAAAATGCTCTTCTAGAACTTTCTAAGAAAAGAGAGTTATTTCAAGATCTTGCTCCATTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCGCCCAATCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTCGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACAAGTAAGTCAAGACCATTTGAATACTTGAGGCTTACTAGTCTGGGTGTCATTGGTGCACTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTGTGCCTGCGCACCATGGAAATGGGCAGTGAACTGTCAAAAACGGTTGCAACATTTATTGTTCAAAAAATTCTGTTGGATGATGTTGGCTTGGATTATATCTGCACTACAGCAGAGCGATTTTTTGCAGTAGGTCGAGTTTTAGGGAACATGGTGGCAGCTCTTGCTGAGCAACCCTCATCTCGTTTGTTGAAGCATATCATTCGATGCTATCTTCGCCTTTCAGATAATCCAAGGGCTTGTGATGCATTAAGAAGCTGCCTTCCAGACATGTTAAGAGATGCTACATTCAACAGTTGCCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGTGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTTGATCATATGATAGTGACCTGA 963 0.4413 MSNLPQSLSMNAAFGGGGGGPPPSPGASAATKDRKMASAEQLVLELSNPDLRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPDMLRDATFNSCLREDPTTRRWLQQLLHNVGVNRVPALQAGGGFDHMIVT* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02748 320 FunFam Cell differentiation protein RCD1 32 303 - -
Rops11g02748 320 Pfam Cell differentiation family, Rcd1-like 42 300 - -
Rops11g02748 320 PANTHER UNCHARACTERIZED 32 303 IPR007216 GO:0006402|GO:0030014
Rops11g02748 320 SUPERFAMILY ARM repeat 44 275 IPR016024 -
Rops11g02748 320 Gene3D - 30 301 IPR011989 -
Rops11g02748 320 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02748 Rops-Chr11 47330192 47341269 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Rops11g02748 Rcd1 4.4e-130 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02748 K12606 - gmx:100784529 590.497