LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g02724	ATGGGCTCATTATGTGGGTACAAGCTTGAGATTTGGAAACAGACCAATGGAAAGTTAGATGCATTTGTTGCTGCAACATGCACTGGTGGTGGTAGTGTGGCTGGTATTTCCAGGAAGCTTTGCATGCCCTTTCACCCTGTCCACCGGTTGGGTTGTCCAGATTCGTTTTCCAATTTGAAGTTGTCAATGTTGAAGATGGATTTGGAAGGAGCTTTGAATTCGAAGATGAAGGGTGCTGGAAACCAAAGCAGCAAAGATATGATGTTCAGAGCTGATAAAATTGATTTCAAAAGTATGGATGCACAGTTGGGAAAGCACTTAAGCAGGGTTTGGTCGAGAAGCATTGAGACAAAAAGGCCTAAAGAAGAGTGGGAGATTGGTTTGCCCAAATTGGATTTGCAATATATTGTATCTCATGGGGCTTATGTGAAAGCGTTGGATTGGGGTAACGATGGTGTCACCACTGCTGCTGAAACTGCATTTATCGACACCTTTCAGGCTGGAGTGCAATTTTATACATACACGGGACAAATGGGAAGTCAAGACCTAAAAGGTTTTCACTTCTCCGCCTCCAAGCCTCCCCAGCCTTCTGCCCCGCCGGGTAAGTCGCCAGATCGACAAACGCAAACACTTATTGGACAGCCATCCTTCAGAGATACACCTCCTTCCGGTGGCCATAGACCGGAGAAGGAAACCACATCTAACACTAGTCAAGATGAGTCAACTGTTTCAGAGATGATGAGGGACGAGAATCCCAATAATCAAGTGCATAAGACCCCTGAAGTTACAGATATTGTTTCTAATAATGTACCACGCAAGGAATTCGTGGAGAATGATTATGAAGTCATTCACGGTGATTGGCTGATTGTATCACGGAAGAAAAAGCAGGTGAAGAGTGGCATCTCACCAGGAGCGAAATCGATGATTGCTAAAAGTGATAAAAATATCAATAAATTCAATGCCCTTTCCATTTCAGATGAAGTCGTCATCGAAAGCAAATCTCAAAAGACATCCTTTCATGCTTCTACTAGTACACGAGTGCAGCCACGTGATGGTTCTAATTGGATTAAAAAGAAAAGATCTAGAATGGACCTTGGGACCTCTTCAATCAACCTAAGTGATGGTTCTAAATGCTTAGATACTAGAACTGGGGTTGTGATCAAATCTCCAATGACAAACAACAATCATCGTCCTCCTAAGGACAAAAAGGAGCATACTCCAACCATGCATGCACCTCTAGTTGTTGATCAGTCTAAAGTTAATCAAATCATGTTTTTTGAGGAGCCCAAACCTCCCAATGGATCGTCTGTTGTAGGCGAACCTCAGAGGCCTGAAGAAACCAGTATACTTCCAATTGATGAGGAGGTTTTAGACGTCACCTCCATGGAAAGGGACGTTGGTCCTGATGATTAA	1413	0.4338	MGSLCGYKLEIWKQTNGKLDAFVAATCTGGGSVAGISRKLCMPFHPVHRLGCPDSFSNLKLSMLKMDLEGALNSKMKGAGNQSSKDMMFRADKIDFKSMDAQLGKHLSRVWSRSIETKRPKEEWEIGLPKLDLQYIVSHGAYVKALDWGNDGVTTAAETAFIDTFQAGVQFYTYTGQMGSQDLKGFHFSASKPPQPSAPPGKSPDRQTQTLIGQPSFRDTPPSGGHRPEKETTSNTSQDESTVSEMMRDENPNNQVHKTPEVTDIVSNNVPRKEFVENDYEVIHGDWLIVSRKKKQVKSGISPGAKSMIAKSDKNINKFNALSISDEVVIESKSQKTSFHASTSTRVQPRDGSNWIKKKRSRMDLGTSSINLSDGSKCLDTRTGVVIKSPMTNNNHRPPKDKKEHTPTMHAPLVVDQSKVNQIMFFEEPKPPNGSSVVGEPQRPEETSILPIDEEVLDVTSMERDVGPDD*	471

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops11g02724	470	MobiDBLite	consensus disorder prediction	388	408	-	-
	Rops11g02724	470	MobiDBLite	consensus disorder prediction	227	242	-	-
	Rops11g02724	470	MobiDBLite	consensus disorder prediction	428	451	-	-
	Rops11g02724	470	MobiDBLite	consensus disorder prediction	184	257	-	-
	Rops11g02724	470	MobiDBLite	consensus disorder prediction	202	217	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops11g02724	Rops-Chr11	46902478	46911656	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g02724	73	162	MAP Kinase Kinase Kinase	AT3G22750	53.774	1.27e-26	108

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g02724	-		-	gmx:100820513	156.377