Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02717 ATGCCTAAGCAGAAATGTCTCATCTACTTTACAATGGGTGGAGATGGACCGAAAGGGCACGATGGTACCATAACAGCACAAAAGCGAGAATCGATGAACTCACCAACTGGGTTTGTGTTTAAGGAATGCAACATAAGTGGGAGTGGTAGTAAAACCCAACTTGGGAGAGCTTATGGACCATTTTCAAGAGTTATCATTGCTAATTCGAACCTTAGTGATGTGGTTCGACCAGAGGGTTGGTCTGCTTGGGACTACGATAAACATGAAGCAAATTTTACGTATGTGGAGGAGGGTAACAGTGGAGCAGGGGCAGATATATCTAAGCGAGTTAAATGGATAAAGCATATGAATGCAAACTGGGAAACTGCTGTCTTTAGTGCATCTGTTGTTTCTGGTGCCTACAGTGTTACTCTTGCTAGCTTTCATGTTCGGGAAAAAACCAAACTCAAGCTTGCTTCCGATGCTTCAAAAAACTACCTGTCAAATGGTGGCAGTTATTTCAAGCATCTCGAACTTCTCCTCAGAAGGCTTAAACAAAAGGTTAAAGCCTTAAACCTTGAAGAAATTGTTGAAGAACATATTAACAACTTATTAGTCGAATCTTCTGATGAAGAATCTGCTAAAGAATCTGAAAATCAGATCCAATCAGATGATCAAATATCAGAAACGGATTCTGATAACAACCTTGAAATTAATGTCTTAACTAAAGAACAAGATATTCTTTTTGAAGTCATTAATGTTATTCTTGATATTCAGGAAAGAAACCAATACTTAACAAAACTTAAACAATCTTTAGAAGCAGAATCTTCTGAAAAGAAAAACCTTGTTGTTCAAAACAAATTTGATTTAAAATAA 855 0.3708 MPKQKCLIYFTMGGDGPKGHDGTITAQKRESMNSPTGFVFKECNISGSGSKTQLGRAYGPFSRVIIANSNLSDVVRPEGWSAWDYDKHEANFTYVEEGNSGAGADISKRVKWIKHMNANWETAVFSASVVSGAYSVTLASFHVREKTKLKLASDASKNYLSNGGSYFKHLELLLRRLKQKVKALNLEEIVEEHINNLLVESSDEESAKESENQIQSDDQISETDSDNNLEINVLTKEQDILFEVINVILDIQERNQYLTKLKQSLEAESSEKKNLVVQNKFDLK* 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02717 284 Coils Coil 258 278 - -
Rops11g02717 284 MobiDBLite consensus disorder prediction 201 223 - -
Rops11g02717 284 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 120 - -
Rops11g02717 284 Pfam Pectinesterase 4 124 IPR000070 GO:0030599|GO:0042545
Rops11g02717 284 Gene3D - 3 142 IPR012334 -
Rops11g02717 284 SUPERFAMILY Pectin lyase-like 5 134 IPR011050 -
Rops11g02717 284 Coils Coil 167 187 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops11g02717 Rops-Chr11 46812051 46816225 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02717 16 132 Carbohydrate Esterase AT1G05310 35.897 1.53e-19 85.9