Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02712 ATGGAGAACTCACAGATTTTCACTCTCTTCAGTTTTCTAATTGTTGCTTTAGGAGTTTGTGATGCTTTGGATTGTTCCAATCCACCAAAGGTTATTGAAGTGAAGCAGTCAGGGCAGGGAGGAAGCTTCAAAACCATCCAAAGCGCCATTGATTCTATCCCTAAACCTAACACTCAGTGGACTCACATCCGAATTTCAGCAGGAATTTATACAGAAACAGTCTCTATCAGCAAAAATAGGCCATGCATTTTTCTTGAAGGTGTTGACAGTTCCTCCACCATCATTCAATATAGCAACCACGGCACGAGGAGTACCACTGCCACTTTTACATCGTTAGCGGATAATATTGTAGCAAAAGGCATTACATTTGAGAACACATATAACATTCCACCTTATGCCCCAGCTAATAGAGGCATTTTACCAGCATTAGCAGCTAAAATAGAAGGTGATAAATCAGCCTTTTATAACTGTTCCTTTAAAGGGGTGCAAGATACCTTGTTGGATCGTAGTGGACGCCATTATTTTAAATATTGCTACATTCAAGGTGGAGTGGATTTTATATTCGGAGATGGCCAATCTATCTATGAGAAATGTCTCATCTACTTTACAATGGGGGAAGATGGACGAGGGCAAGATGGTGTCATAACGGCACAAAGGCGAGACTCTATCAACTCACCAACTGGATTTGTGTTTAAGGAATGCAACATAACTGGGAGTGGTAGTAAGACCCAACTTGGGAGAGCTTATGGACCATTTTCAAGAGTTATTATTGCTAATTCGAACATCAGTGATGTGGTTCGACCTGAGGGTTGGTCTGCTTGGGATTACGATAAACATGAAGGAAATCTTACATATGTAGAGGAGGGTAATAGTGGAGCAGGGGCAGACATATCTAAGCGATCGCGAGTCAAATGGATGAAGCCTATGAATGCAAGAGTTTGTGATGCTTTGGATTGTTCTAATCCACCAAAGGTTATTGATGTGAACCAGTCAGGGCAAAGAGGAAGCTTCAAAACCATCCAAAGCGCCATTGATTCTATCCCTAAACGCAACACTCAATGGACTCACATCCAAATTTCTGCAGGAACTTATAGAGAAACGGTCATTATCAGTAATGACAGGCCATGCATTTTTCTTGAAGGAGCAGGCAGTTCCTCCACCATCATTCAATATGGTAACCATGAAATAATGAGTACCAGTGCCACCTTTTCATCATTAGCGGATAATATCGTGGCAAAGAGCATTACATTTGAGAACACATATAACATCCCACCTTTTGCACCACCTAATAGAGTCATCTTACCAGCATTAGCAGCGAGAATACAAGGCGATAAAACTGCCTTTTATAACTGTTCCTTTAAAGGGGTGCAAGATACCTTGTGGGATTATGGTGGACGTCATTATTTCAAATATTGCTACATTCAAGGTGGAGGAGATTTTATATTTGGTGATGGTCAATCCATCTATGAGAAAAATCTCATCTACTTTACAATGGGGCCTAATGGACCAGGGCGCGATGGTACCATAACGGCACAAAAGCGAGAATCGATGAACTCACCAACTGGGTTTGTATTTAAGGAATGTAACATAACTGGGAGTGGTGGTAAGACGCAACTTGGGAGAGCCTATGGACCATTTTCAAGAGTCATTATTGCTAATTCCAATCTCAGTGATGTGGTTCGACCAGAGGGTTGGTCTGATTGGAACAAACCTGTAGCAAATCTTGTTTATGTGGAGGAGGGTAACAGTGGACCAGGGGCAGACTTGTCTAAGCGCGTCAAATGGATGAAGCGTATGGGTGCAACTGTTCCTATTTATACCATGCAGACAATGTGGCTTCCTCGTTGTATTTGTGAAGAGATCGACAAAAAGACTCGTCAATTCTTGTGGTCTAATAATAATCAATCAAGTGGCTGGAAATTAGTTAGTTGGGAGAAGATTACTTGTCCGAAAGAGTTAGGGGGATTGGGGGTTAGAGACACGAGAATGGCTAATGTGGCTCTTTTGGGTAAACTTGGTTGGAAGATGATTCATGAGAAGCATAAATTGTGGGTGCAAGCTCTAACCCATAAATATTTGAAAGGGTCATCAATGCTTAATGCACCGAGAACAGAAACAGCGTCTGCTGGTTGGAGAAGTATTCTTAAGGCAATGACAGCTTTAAAGGAGGGATATGATGTGAAACTTGGAACAGGTGATTCATCCTTATGGTACTCTGATTGGTCAGGATGTGGGAAACTTTGTCATAAAGTGGATTTTGTTCACATTTCTGATACTGAATTACAGGTTTCAGATCTGTGGTGTAATGGTGTTTGGGATTTTAGTAGGATTCATACTATTATTCCAGATAACATAGTGCAACATATTAGAAATATTCAAATTCCTTTTAATAATTATCCTCAGTGGGAGGATTGCTTTATTTGGACAAGTGGTGATGGGGTGTACTCTACTGCATCAGGTTATGACTGGTTGCTAAGAAGGGGGAGGAATGAAGGAGTTCAAGGCCCTTGGAAAGTGATTTGGAAGCTAAAAGTTCCAGAGAAAATCAAGTTCTTTCTTTGGCTTTTGGTCCATAATGCACTTCCTACGAATGAATTGAGGTTTAGAAGGAATATAGGTTCCTCATCCAACTGCATGAGATGTTCATCAAATGTGGAGGATATTAAACATTGTCTTCGTGACTGTCCTCATTCTAGAGAGCTATGGCTTAGAGTTGGTCTTTGCTGTGTGCCAAATTTTTTTCATGATGATTTGAATAGGTGGCTTTTAACTATTCTTGGTTGTCAGGAGGTTAAAGTGGCATTAGCAACTTTATGGTGGGCTTGGAGATGGAGGAATAATATGGCTATGGATGTTAATAAATGGAATATCAGTTCTGTGTTGAAACAAATTTATTACTCAGTTGCAGATTTTGATTTGCTCTCTTCTTCATCTAAACAGTTTACTTTTATAGGTCGTGGGAATTGCTGGAGTCCTCCACCATTACATGCTGTCAAGATCAATGTTGATGGTAGCTGCTGGAGTGACTGTTCTCGTGTGGGATCAGGTGGTGTGATCCGTGGCAGTGCTGGTAATTGGATCATAGGTTTTAGCTCGTTTGGTGGCTGTGGAGAAGTGCTTATGGCAGAACTTCAGGCTGTTGAGAGAGGGCTGCTTCTGGCTTGGGAAATGGGCTTCAAGATGGTGGTATATGAAAGTGATTCAAAGGAGGTGATCACACTTTTAGGGAATAGAACTTATTATCATCTTCACAAATATGCTGGGATTCTGTCACAGTTATTTGATTTAATCCAGAGGCCTTGGAAGGTTACTATGCAGCATGTGTTGCGTGAAGCTAATATGCCTGCAGATTTTATGGCAAAGTTGGGAATTAGAGAGGGTATTGCTTGGAAGGTTTGGCATGAACCTCCACCAGATTTGGAGTCTTTGTTGGTTGATGATTTGATGAGTGTCCTTGTGTAG 3462 0.4116 MENSQIFTLFSFLIVALGVCDALDCSNPPKVIEVKQSGQGGSFKTIQSAIDSIPKPNTQWTHIRISAGIYTETVSISKNRPCIFLEGVDSSSTIIQYSNHGTRSTTATFTSLADNIVAKGITFENTYNIPPYAPANRGILPALAAKIEGDKSAFYNCSFKGVQDTLLDRSGRHYFKYCYIQGGVDFIFGDGQSIYEKCLIYFTMGEDGRGQDGVITAQRRDSINSPTGFVFKECNITGSGSKTQLGRAYGPFSRVIIANSNISDVVRPEGWSAWDYDKHEGNLTYVEEGNSGAGADISKRSRVKWMKPMNARVCDALDCSNPPKVIDVNQSGQRGSFKTIQSAIDSIPKRNTQWTHIQISAGTYRETVIISNDRPCIFLEGAGSSSTIIQYGNHEIMSTSATFSSLADNIVAKSITFENTYNIPPFAPPNRVILPALAARIQGDKTAFYNCSFKGVQDTLWDYGGRHYFKYCYIQGGGDFIFGDGQSIYEKNLIYFTMGPNGPGRDGTITAQKRESMNSPTGFVFKECNITGSGGKTQLGRAYGPFSRVIIANSNLSDVVRPEGWSDWNKPVANLVYVEEGNSGPGADLSKRVKWMKRMGATVPIYTMQTMWLPRCICEEIDKKTRQFLWSNNNQSSGWKLVSWEKITCPKELGGLGVRDTRMANVALLGKLGWKMIHEKHKLWVQALTHKYLKGSSMLNAPRTETASAGWRSILKAMTALKEGYDVKLGTGDSSLWYSDWSGCGKLCHKVDFVHISDTELQVSDLWCNGVWDFSRIHTIIPDNIVQHIRNIQIPFNNYPQWEDCFIWTSGDGVYSTASGYDWLLRRGRNEGVQGPWKVIWKLKVPEKIKFFLWLLVHNALPTNELRFRRNIGSSSNCMRCSSNVEDIKHCLRDCPHSRELWLRVGLCCVPNFFHDDLNRWLLTILGCQEVKVALATLWWAWRWRNNMAMDVNKWNISSVLKQIYYSVADFDLLSSSSKQFTFIGRGNCWSPPPLHAVKINVDGSCWSDCSRVGSGGVIRGSAGNWIIGFSSFGGCGEVLMAELQAVERGLLLAWEMGFKMVVYESDSKEVITLLGNRTYYHLHKYAGILSQLFDLIQRPWKVTMQHVLREANMPADFMAKLGIREGIAWKVWHEPPPDLESLLVDDLMSVLV* 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02712 1153 Gene3D - 325 619 IPR012334 -
Rops11g02712 1153 SUPERFAMILY Pectin lyase-like 28 304 IPR011050 -
Rops11g02712 1153 SUPERFAMILY Pectin lyase-like 322 596 IPR011050 -
Rops11g02712 1153 Pfam zinc-binding in reverse transcriptase 815 902 IPR026960 -
Rops11g02712 1153 Gene3D - 996 1125 IPR036397 GO:0003676
Rops11g02712 1153 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 321 601 - -
Rops11g02712 1153 CDD RNase_H_like 1000 1121 IPR044730 -
Rops11g02712 1153 Pfam Reverse transcriptase-like 1001 1121 IPR002156 GO:0003676|GO:0004523
Rops11g02712 1153 Gene3D - 26 317 IPR012334 -
Rops11g02712 1153 SUPERFAMILY Ribonuclease H-like 998 1126 IPR012337 -
Rops11g02712 1153 Pfam Pectinesterase 35 306 IPR000070 GO:0030599|GO:0042545
Rops11g02712 1153 Pfam Pectinesterase 333 596 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02712 Rops-Chr11 46753960 46770367 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02712 320 568 Carbohydrate Esterase AT2G19150 48.400 3.19e-62 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02712 - - zju:125424081 546.199