Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops11g02705 | ATGGCATCTTCTTCAGACTCATGGATGAAGGAATATAATGAAGCAATGAAACTCGCTGATGATATCAATGCCATGATTTCTGAGCGGAGTTCACTTCCTGCATCTGGACCCGAAACCCAGCGCCATGCATCTGCTATAAGAAGGAAGATCACAATATTGGGGACCAGACTTGATAGCTTGCAATCCCTTTTGTCAAAGCTCCCTGTAAAGTCTGAGAAGGAGATGAATCGTCGCAAGGACACGCTTGCAAATTTGAGGTCAAAAGTAAACCAAATGGCTTCAACACTGAACATGCCAAACTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAATAAAACCAGATGCAATGAGCAGAACTGTTGGCCTGGATAACGGTGGACTTGTTGGTCTTCAACGGACAATTATGAAAGAGCAAGACGAGGGCCTTGAGAAATTGGAGGAGACTGTAGTAAGTACAAAACATATTGCGTTGGCAGTGAATGAAGAGCTGAGCCTACACACTAGACTCATTGATGACTTGGACAACCATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAGAAGAACTTGGCAATTTTAAACAAACGTGCCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTATTCAGTGGTTGGTATAGTGGTTTTGGTGGTTGTCGTATGGCTGTTGGTCAAATATTTGTAA | 690 | 0.4391 | MASSSDSWMKEYNEAMKLADDINAMISERSSLPASGPETQRHASAIRRKITILGTRLDSLQSLLSKLPVKSEKEMNRRKDTLANLRSKVNQMASTLNMPNFANRDSLLGPEIKPDAMSRTVGLDNGGLVGLQRTIMKEQDEGLEKLEETVVSTKHIALAVNEELSLHTRLIDDLDNHVDVTDSRLRRVQKNLAILNKRAKGGCSCLCMLYSVVGIVVLVVVVWLLVKYL* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops11g02705 | 229 | Gene3D | - | 134 | 197 | - | - | |
Rops11g02705 | 229 | PANTHER | SYNTAXIN | 34 | 218 | IPR045242 | - | |
Rops11g02705 | 229 | FunFam | syntaxin-51 isoform X2 | 135 | 197 | - | - | |
Rops11g02705 | 229 | Pfam | SNARE domain | 170 | 221 | IPR000727 | - | |
Rops11g02705 | 229 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 133 | 195 | IPR000727 | - | |
Rops11g02705 | 229 | SMART | tSNARE_6 | 128 | 195 | IPR000727 | - | |
Rops11g02705 | 229 | CDD | SNARE_Qc | 136 | 193 | - | - | |
Rops11g02705 | 229 | SUPERFAMILY | SNARE fusion complex | 125 | 194 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops11g02705 | Rops-Chr11 | 46561769 | 46566685 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops11g02705 | 1 | 229 | SNARE and Associated Proteins | AT1G16240 | 71.552 | 1.16e-120 | 340 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops11g02705 | K08503 | - | gmx:100799465 | 373.244 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Rops11g02705 | 11 | 46561769 | 46566685 | Rops11g02705 | 11 | 46561769 | 46566685 | ECH | |
Rops11g02705 | 11 | 46561769 | 46566685 | Rops9g00287 | 9 | 3551241 | 3553475 | PCT |