Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02676 ATGGGCTCACCTTGGAGGGACGATGAAGCTTCATGGCAACGACGAGATGAGTGGAAGCTGGACACTCCAAGTGAAGATGGGGATTTAAGACAGCATGATTTTCGGGAAGGAGCCTTTTGTCCTCCGACAGGATCTTCACACCAAGAGTGTCGAAATGTTCTACTTGACCTACGGAGTGGAGCCAAAAGGTCACTTGCTGATCCTCCTAAACAAGTCCTTGCTCTAAAACCTCGTGATATTAGTTCAAATAGGCCACCTTCGCTCCTCGTTGGTGGGAGTGATGCCTTTGCACGTTTATATGATAGAAGAATGCTACCGCCTTTGAGCTCCTGTCGGAAAAGAATGTCTCCACCTCCTTGTGTTAATTATTTCTGTCCAATGCATCTTTCTGATCGTGGACATCCAAGCTTGCACTTAACTCGTGTTACATTCAATCCTGATGGCAACATCTTGCTAGATCAGAATTATGTAAGTAAGATAAGTGGTGTCAGGTTGACAAGACTTGCCCCTGTGGTAGCTGAAAATGTGACGCGATCTTTGCATCGCATCGATGGTGAAACTTTCTGCTATATTGATCCAGAGTATCAGCAAACAGGAGTGCTCAGTGTCAAGTCCGATGTTTATTCCTTGGGGATCATGTTTCTACAATTATTGACAGGCAGGGCTCCGATGGGATTGGCTCACCATGTTGAAGAGTGTTTAGAGAAGGGCATTGGTGGCAATGCTGGACCCATCTCTCACGGACTGTCCTCTTGA 756 0.463 MGSPWRDDEASWQRRDEWKLDTPSEDGDLRQHDFREGAFCPPTGSSHQECRNVLLDLRSGAKRSLADPPKQVLALKPRDISSNRPPSLLVGGSDAFARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTRVTFNPDGNILLDQNYVSKISGVRLTRLAPVVAENVTRSLHRIDGETFCYIDPEYQQTGVLSVKSDVYSLGIMFLQLLTGRAPMGLAHHVEECLEKGIGGNAGPISHGLSS* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02676 251 Gene3D Transferase(Phosphotransferase) domain 1 146 242 - -
Rops11g02676 251 PANTHER OS02G0152300 PROTEIN 148 237 - -
Rops11g02676 251 Pfam Protein tyrosine and serine/threonine kinase 149 225 IPR001245 GO:0004672|GO:0006468
Rops11g02676 251 SUPERFAMILY Protein kinase-like (PK-like) 148 225 IPR011009 -
Rops11g02676 251 MobiDBLite consensus disorder prediction 1 46 - -
Rops11g02676 251 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02676 Rops-Chr11 46079353 46080223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02676 148 237 Receptor kinase-like Gene Family AT1G78940 67.778 1.51e-34 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Rops11g02676 PK_Tyr_Ser-Thr 1.8e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02676 K11807 - gmx:100820036 236.113