Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02667 ATGAGACATAAGAACAACAATACAGAGAGTGGTTTCTTGGGAACCCTATCTTCCTCTTCCTTCAGAAACCTTCTTCCCAGATCTTCCACACGCAAACCCATTTCTTCAAACCCCAAATCTGATGTTGAAAACACTCCCCCCACTCATCCAAACATCCCCATTAATCATCACAACCAATCACAGCCCAACTCACGATTTTCTGTTAAAGACCCACCTGTGAAGGTTGTGGTGAGAATTAGACCTGAAAAAAGCAATGGAAAAGAGGGTGATTGGAAAATTAAGAAGGTTTCTTCTGATGCCTTGTGTGCTGGGGACATGCAGTTCAAGTCTGATGAAGTTTTTGATGCCAATTCCAATCAGGAAGATGTTTTTCAGTCAGTGGGTGTTCCATTGGTTAGAAATGCTTTAGCTGGTTACAACACTTCAATTCTGTCTTATGGCCAGTCTGGAAGTGGCAAGAGTTATACAATGTGGGGTCCCCCAAGTGCCGTGGTTGAGGAGCCCTCCCGTTATAGTCACCAGGGAATTGTTCCTCGGATCTTCCGAATGTTATTTTCTGAGCTTGAAAGAGTGAGACTTAAGTCTGATCAAAAGCAGTTCAACTATCAATGCCGTTGTTCTTTTCTTGAGATATATGATGAACAAATTGGGAATTTACTCAATCCAGCCCAGCAGAACCTTGAGATTAAGGATGATTCAAAAAATGCATTATACATTGAGAATCTGATTGAGGAATATGTCAATTGCTATGATGATGTGGCACAAATTCTGATTAAGGGCCTTTCAAGCAGAAAAATTGGAGCAAGGAGCTTAAATTCCAATAGCTCTGGATCTCATATCATTTTCACTTTTGTCATTGAGTCTTTGAGTAAGGGGACCTCAAAGGGTTTCAGTAGCTTGAAAACTAGCAGAATCAGCCTGATTGATCTTGCTGGACTGGACAGGGACAAAATTGACAATGGAGGCAGCCAATGTCTATGGGAAAGCGGACATGTAAATAAATCATCATCTCAGCTTGGGCATTTAGTGGATGCTCTGACTGACGGATCTCAGTCTGGAAAAGATGAAGACATTCCACACAGTAACTCCTGTTTAACACGTTTACTGCAAGAATCACTTGGTGGAAATGTCAAACTCTCAGTAATATGTTCCATCTCCCCTGATAACAAGAGTAATGATGAAACACTGAGCACACTCAGATTTGGAGAGCGAGTAAGATCCATCAGAAATGAGCCAGTTATCAATGTAATAAAGGAGGCTGATGTTGATTTGAGTGATAAAATCCGGCACTTGAAGGAAGAACTTATTAGAGCAAAGGCTGATGTTCATAGCTCAGATGGGAGTAAAAATGGATGCTTCCAAGGACATAATGTGCGGGAAAGCCTTAATCAGTTGAGAGTCAGCTTAAACCGCTCTCTACTCCTATCTAACATAAATAATGATACTGATGAAGATGTAAATGTCAATGAGGATGACATAAGGCACTTGTGCCAGCAAATTGATGAATTTGATAGTTCATGTGGAGGGAATCCAAAAGACATATCTGTCAGTGAAGATTGTGATGCAGACACAAACAGTGGTGATGAAATTGAAAAAGTGGAGGTATGTTATGGAAAAGCATTGAGTAAGCCTTGTCATGAGGACATTGCAACAGCAGCAGATAACCTTGTATGCACAGCTAACCCTTCAAGGGAAATTAAATCTACATTCAGAGATGGCATTTCAGTTGGTTCATGCCGTCAGTCTCCAATACTTGATGGACCACAGTTGTCCGAGTCTCCAAAATTCAGCAATACCCAAAGGAAAAGCATGGCCTCATCGAGTTATCTTGGAAATTGGAACAATGTGGCAGAGAGTTCAAGTTTCAGTAAAGATGTGTTAAGAAAGTCATTCAAACGGGGTGAGCATATGCGACCCTCATCACGGTCGAGCAAATCTGAGTCCTTGGCAGCAAGCCTTAAGAGGGGATTACAGATGATTGACTATCACCAGAAGAACTCAGCATTGAACAAATCTTCAGTTTCCTTCTCCTTTGAGCGCTTAACTTTGACACCTAGTCCAGAAATTGACAAGGTGGAATCTTATGATCAACCAATACAACACAAACTGTCCAGTGATGAAGTAACTTCTACCTTCCTTTGTGCATCTTGCCAGACAAAAATATCTAATCAGGATTCCACTGAGGGCCAATATACCTTGAAATCTTGGTCTGAAACAGTTGGAAAAGCAGGAAATCCTGATGGACTGACAGAAAAAATTCCAAATCATTTGGAAAATGTAATGGCAAAAGGCATCATGAGAGAGAAGGAGCTCGAGAATATTTGTAAGGAGCAAGCAGCTAGAATTGAGCAACTAAATCAGTTGGTGGAGAAATTGAAAGGAGAGAAAGAACTGAACTCCATTATGGTGTATGGTCAGTTTGAAGAGTATAACTCAATGAAGAATGAAGACAAGCTTCTGAGGGGCACTTCTTCAAATGGTCATTTACCGTACATTATGGAGGAAAGATGTGAAATTAAAGAAGTCCAGGAAGAAATTCAGAGTCCAAGAAGCTTCATCTCTTTTGATTCAGCTGAGAAGGAATCACTTCTTAAGGAAATTCAGAGTCTAAGGAGCAAGCTGCAATTATATAGTGATGGACAGAGATCTTCTTTGATGTCAAGATCCATCCAACTTGGAAAAAGTGGAGTATTTTCTCGTGATAATGGGAATGAAGAGCTAGAGAATGAAAGACAAAGATGGACAGAGATGGAAAGTGAGTGGATTTGTCTTACTGATGAACTTAGGGGTGATCTTGAGTCCTACCGCCAGCGTGCGGAGAAGTTGGAGTCAGAACTGAATCTAGAGAAGAAGTGCACTGCAGAGATGGATGATGCACTAAAAAGAGCTGTTAATGGGCATGCTAGAATGGTAGAACACTATGCCGATCTACAAGAAAAATATGATGACTTAGTTGCTAAGAATGATGCTATAATGGAAGGGATAGCAGAGGTGAAGAAGGCAGCAGCAAAAGCCTCAAAAAAAGGTCATGCCCGCTTTGCCAAATCTCTTTCAGCTGAGCTTTCTGCATTGAGGTTGGAGAGAGAAAGGGAAACAAAACTATTGAAAAAGGAGAATCAGAATTTGAAGATTCAACTTCGAGACACTGCTGAAGCGGTTCAGGCTGCTGGAGAACTACTTGTTAGACTAAGAGAAGCTGAACAAGCAGCATATGTTGCAGAGGAGAACTTTACAAATGTGCAACAAGATAATGAGAAGTTGAAAATGCAAATGGAGAAGCTGAAAAGAAAACACCAGACAGAGATTAGTACCATGAAGCAGTATCTTACAGAGAGCAAATTACCAGAGTCAGCACTACAACCACTGTATAGAGAGGATTCTGATGTGATACACAACAATGCAACTTCCTCCTATACTTATGATGATCAAGCATGGAGAGCAGAATTTGGAGCAATATATCAGGACCATTACTAA 3474 0.4079 MRHKNNNTESGFLGTLSSSSFRNLLPRSSTRKPISSNPKSDVENTPPTHPNIPINHHNQSQPNSRFSVKDPPVKVVVRIRPEKSNGKEGDWKIKKVSSDALCAGDMQFKSDEVFDANSNQEDVFQSVGVPLVRNALAGYNTSILSYGQSGSGKSYTMWGPPSAVVEEPSRYSHQGIVPRIFRMLFSELERVRLKSDQKQFNYQCRCSFLEIYDEQIGNLLNPAQQNLEIKDDSKNALYIENLIEEYVNCYDDVAQILIKGLSSRKIGARSLNSNSSGSHIIFTFVIESLSKGTSKGFSSLKTSRISLIDLAGLDRDKIDNGGSQCLWESGHVNKSSSQLGHLVDALTDGSQSGKDEDIPHSNSCLTRLLQESLGGNVKLSVICSISPDNKSNDETLSTLRFGERVRSIRNEPVINVIKEADVDLSDKIRHLKEELIRAKADVHSSDGSKNGCFQGHNVRESLNQLRVSLNRSLLLSNINNDTDEDVNVNEDDIRHLCQQIDEFDSSCGGNPKDISVSEDCDADTNSGDEIEKVEVCYGKALSKPCHEDIATAADNLVCTANPSREIKSTFRDGISVGSCRQSPILDGPQLSESPKFSNTQRKSMASSSYLGNWNNVAESSSFSKDVLRKSFKRGEHMRPSSRSSKSESLAASLKRGLQMIDYHQKNSALNKSSVSFSFERLTLTPSPEIDKVESYDQPIQHKLSSDEVTSTFLCASCQTKISNQDSTEGQYTLKSWSETVGKAGNPDGLTEKIPNHLENVMAKGIMREKELENICKEQAARIEQLNQLVEKLKGEKELNSIMVYGQFEEYNSMKNEDKLLRGTSSNGHLPYIMEERCEIKEVQEEIQSPRSFISFDSAEKESLLKEIQSLRSKLQLYSDGQRSSLMSRSIQLGKSGVFSRDNGNEELENERQRWTEMESEWICLTDELRGDLESYRQRAEKLESELNLEKKCTAEMDDALKRAVNGHARMVEHYADLQEKYDDLVAKNDAIMEGIAEVKKAAAKASKKGHARFAKSLSAELSALRLERERETKLLKKENQNLKIQLRDTAEAVQAAGELLVRLREAEQAAYVAEENFTNVQQDNEKLKMQMEKLKRKHQTEISTMKQYLTESKLPESALQPLYREDSDVIHNNATSSYTYDDQAWRAEFGAIYQDHY* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02667 1157 Coils Coil 925 952 - -
Rops11g02667 1157 Coils Coil 768 795 - -
Rops11g02667 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 439 IPR027417 -
Rops11g02667 1157 Coils Coil 1077 1104 - -
Rops11g02667 1157 FunFam Kinesin-like protein KIN-12F 68 446 - -
Rops11g02667 1157 Coils Coil 1014 1041 - -
Rops11g02667 1157 SMART kinesin_4 70 416 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 ProSiteProfiles Kinesin motor domain profile. 72 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 PRINTS Kinesin heavy chain signature 138 159 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 PRINTS Kinesin heavy chain signature 304 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 PRINTS Kinesin heavy chain signature 358 379 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 PRINTS Kinesin heavy chain signature 269 286 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 Gene3D Kinesin motor domain 70 449 IPR036961 -
Rops11g02667 1157 MobiDBLite consensus disorder prediction 1 68 - -
Rops11g02667 1157 PANTHER KINESIN-LIKE PROTEIN KIN-12D 63 446 IPR044986 -
Rops11g02667 1157 Pfam Kinesin motor domain 102 408 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops11g02667 1157 MobiDBLite consensus disorder prediction 7 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02667 Rops-Chr11 45612845 45618844 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02667 111 434 Calmodulin-binding Proteins AT5G65930 34.451 3.26e-47 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02667 K10400 - gmx:100817066 1578.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02667 11 45612845 45618844 Rops9g00274 9 3426175 3431802 PCT