Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02659 ATGCCTAGTGTTATTAACCCTGACCCATCTGACAAAGACTCAGAACCCTTTGTTGAAATTGATCCAACTGGAAGATATGGTAGATACAGTGAGCTACTGGGATCTGGTGCTGTGAAAAAAGTGTATAGAGCATTTGATCAAGAAGAAGGTATAGAGGTGGCTTGGAACCAAGTGAAACTCAGAAACTTCAGTGGTAACCCTGCTATGGTGGATAGGCTTTACTCTGAAGTGAGATTGCTTAGAAATTTGACCAACAAAAGCATCATTGCCCTTTACAGCTTTTGGAGGGATGAGCAGCATAACACATTGAATTTCATCACTGAGGTATGCACCAGTGGGAATTTGAGGGAATACAGGAAGAAGCACAAGCATGTGTCCTTGAAGGCTTTGAAGAAATGGTCTAAACAGATATTGGAAGGGTTGAATTATTTGCACATGCATGATCCTTGTATAATCCACAGAGACCTCAATTGCAGTAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCTGCAATTGTGGGCAAGAATCACTCTGCACATTCAATTCTAGGGACACCAGAATTTATGGCACCTGAGTTATATGAAGAGGACTACACAGAAATGGTGGACATATACTCATTTGGAATGTGTGTGTTAGAGATGGTGACACTAGAAATTCCTTATAGTGAGTGTGACAATGTTGCCAAGATATATAAAAAGGTATCTTCAGGTGTGAGACCTCATGCCTTGAACAAGATAAAAGATCCAGAGGTGAAAGCCTTTATTGAGAAGTGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTGAAGAACTTCTCAAGGACCCTTTCTTTGATGTGCTTGATTATGACGAAAATGATTATGACGAAGTTAGTTCATGA 903 0.4086 MPSVINPDPSDKDSEPFVEIDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFSGNPAMVDRLYSEVRLLRNLTNKSIIALYSFWRDEQHNTLNFITEVCTSGNLREYRKKHKHVSLKALKKWSKQILEGLNYLHMHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEEDYTEMVDIYSFGMCVLEMVTLEIPYSECDNVAKIYKKVSSGVRPHALNKIKDPEVKAFIEKCLAQPRARPSAEELLKDPFFDVLDYDENDYDEVSS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02659 300 SUPERFAMILY Protein kinase-like (PK-like) 20 286 IPR011009 -
Rops11g02659 300 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Rops11g02659 300 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Rops11g02659 300 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Rops11g02659 300 CDD STKc_WNK 25 285 - -
Rops11g02659 300 Gene3D Transferase(Phosphotransferase) domain 1 110 289 - -
Rops11g02659 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 286 - -
Rops11g02659 300 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02659 300 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02659 Rops-Chr11 45440069 45441392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02659 6 286 MAP Kinase Kinase Kinase AT5G55560 83.274 0.0 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops11g02659 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02659 K08867 - gmx:100818126 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02659 11 45440069 45441392 Rops11g02659 11 45440069 45441392 ECH
Rops11g02659 11 45440069 45441392 Rops9g00270 9 3368915 3379786 PCT