Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02650 ATGGACGCCGGCGAAGCGAACTCCGCCTCCGAGCTCCGGCGAATGGTTCCGGGAGACTCGGAACTGGAACCGGAAGATCCGAATCGACCCGGGTCGAGGCAAGATTCTGTTGCCGACGGAGCTTCTGCCTCAGGTGCCACCGGCGGCGCTAGGTACAAGCTGATGTCGCCGGCGAAACTCCCGATCTCGAGGTCGCCGTGCGTCACAATTCCTCCGGGGCTCAGTCCGACGTCGTTTTTGGAATCCCCAGTGCTTCTTTCAAACATGAAGGCTTTCCAGGTGGAACCTTCGCCGACTACAGGGTCCCTAAGGGTTCAACAAACAGCACATGGTTCTGTGACCTCTGCTGCATCTACTACATTTCCTGTAACCAGTGTATGCTTCAGTATCAATACTGTTGATGACAGAAAGTCCTGCTTCTTTGAGTTGAGATCACCCGGTAGATCAAATATGGTTCCTGCAGACTTCAACAACCATGTAAGTGAAAAATCCACTCAAATAAATGGTCAAGGAAAAGCTCAATCTTTTGCCTCATCGCCGTTAGTCAAACGTGAAATAGCAGTCCCTTCAAATGAAATAAGTTTATCATCACCTGTTCAAATGGTTAGTTCAGGGGCTGGTGCTCACGAAGTTGATTTGGATGAATTAAACCCCAGGGGCAGCATAGCCGCTGGGCTTCAAGCATCACAAGTTGAGGGTAGGAGCAGTGGACTTTCAGTTGCTGCTGAGAGAGTGTCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAACATGTTAAAGGAAGTGAATTTCCACGCAGTTATTACAAATGTACACATCCTAACTGTGAAGTGAAGAAACTATTTGAACGCTCTCATGATGGGCAAATCACCGAGATAATTTACAAGGGTACACATGATCATCCTAAACCTCAACCAAACCGCCGATACTCTGCTGGAACTATTATGTCGATGCAGGAAGAGAGATCTGATAAGGCTTCTTTGACTAGCCGAGATGACAAAGGATCCAATAATTATGGCCAGGTGTCTCACACAGCTGAGCCTGACAGTACTCCAGAGCTATCACCTGTAGCAACAAATGATGACAGTCTAGAGGGTGCAGGGTTTTTGTCAAACCGGAATAATGATGAGCTTGATGATGATGATCCCTTCTCAAAGCGAAGAAAAATGGATCTTGGAAATGCTGACATCACTCCTATAGTTAAGCCTATCCGGGAGCCACGGGTGGTTGTACAGACTCTGAGTGAGGTTGATATATTGGATGATGGTTATCGTTGGCGTAAGTATGGGCAGAAGGTGGTGAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACCAACGCCGGTTGCCCTGTCAGAAAACACGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACCACATATGAAGGCAAACACAATCATGATGTACCAACTGCAAGGAATAGTAGCCATGACATGGCAGGACCATCAGCTGCAAGTGGACAGACAAGAATTAGGCAAGAAGAAAGTGATACTATCAGCCTTGACCTTGGGATGGGAATCAGCCCAGCTGCAGAAAATAGATCAAACAGTCAAGGAAGAATGGTGCTTTCTGAATTTGGGGACAGTCAAACTCAAACCAGCAATTCCAATTTCAAGTTTGTTCATACAACCCCACCTCCAGTATACTTTGGTGTACTAAATAACAACTCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAGTTCATCTTTAAACCATTCTGCTTATCCTTGCCCGCAGAACATGGGAAGAATACTAATGGGTCCCTAA 1806 0.4629 MDAGEANSASELRRMVPGDSELEPEDPNRPGSRQDSVADGASASGATGGARYKLMSPAKLPISRSPCVTIPPGLSPTSFLESPVLLSNMKAFQVEPSPTTGSLRVQQTAHGSVTSAASTTFPVTSVCFSINTVDDRKSCFFELRSPGRSNMVPADFNNHVSEKSTQINGQGKAQSFASSPLVKREIAVPSNEISLSSPVQMVSSGAGAHEVDLDELNPRGSIAAGLQASQVEGRSSGLSVAAERVSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPNRRYSAGTIMSMQEERSDKASLTSRDDKGSNNYGQVSHTAEPDSTPELSPVATNDDSLEGAGFLSNRNNDELDDDDPFSKRRKMDLGNADITPIVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARNSSHDMAGPSAASGQTRIRQEESDTISLDLGMGISPAAENRSNSQGRMVLSEFGDSQTQTSNSNFKFVHTTPPPVYFGVLNNNSNPYGSRENPSDSSSLNHSAYPCPQNMGRILMGP* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02650 601 MobiDBLite consensus disorder prediction 565 589 - -
Rops11g02650 601 MobiDBLite consensus disorder prediction 375 391 - -
Rops11g02650 601 MobiDBLite consensus disorder prediction 320 391 - -
Rops11g02650 601 ProSiteProfiles WRKY domain profile. 241 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 170 507 IPR044810 GO:0003700
Rops11g02650 601 FunFam WRKY transcription factor 33 408 474 - -
Rops11g02650 601 SUPERFAMILY WRKY DNA-binding domain 243 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 MobiDBLite consensus disorder prediction 477 504 - -
Rops11g02650 601 SUPERFAMILY WRKY DNA-binding domain 413 481 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 MobiDBLite consensus disorder prediction 487 504 - -
Rops11g02650 601 MobiDBLite consensus disorder prediction 333 359 - -
Rops11g02650 601 FunFam WRKY transcription factor 234 306 - -
Rops11g02650 601 Pfam WRKY DNA -binding domain 247 303 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 Pfam WRKY DNA -binding domain 422 478 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 MobiDBLite consensus disorder prediction 565 601 - -
Rops11g02650 601 MobiDBLite consensus disorder prediction 1 50 - -
Rops11g02650 601 Gene3D WRKY domain 406 482 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 Gene3D WRKY domain 237 306 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 MobiDBLite consensus disorder prediction 16 32 - -
Rops11g02650 601 ProSiteProfiles WRKY domain profile. 416 481 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 SMART WRKY_cls 421 480 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g02650 601 SMART WRKY_cls 246 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02650 Rops-Chr11 45363728 45370156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02650 55 601 WRKY Transcription Factor Family AT4G26640 57.194 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops11g02650 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02650 - - gmx:100781491 974.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02650 11 45363728 45370156 Rops11g02650 11 45363728 45370156 ECH
Rops11g02650 11 45363728 45370156 Rops9g00268 9 3352951 3357752 PCT