Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02639 ATGGAACTGATTTTTCTCCTTCAACCCATTTTCACTCGTGGGGTATCTGCTTCACTGCACATAGTTTTGTTACTTGTGCTGGTTGTGTCATGGTTATGGGAGAAAGTCCATGTCGACCATAGAGAAAAGAGTGAAAGAAATGGATTCCATAATACTGGTTTCTTGTACTGCCAACACAGTCTGGTATGTAGCGTAGTTATTTGCGTGTTTAACCTTGTGTTGTGTTTACTAAGCTACTTTTACTGGTATAAACATGTTGGTTCAGAGGAGCTTGTCACAATTTTGGATTTGGCTATCAAAACAGTTGCTTGGGTTGTTGTTTGTCTTTATTTGCATGTTAGAAAATCCAATACACAGGAACCGAATTTCCCATGTTTCTTGAGAGTTTGGTTTTGGGTCTATGCCTTTGTGTCTTGTTGTTGCCTTGTTATAGACTTTGTAATCTATGGAAAGCATGTTTTCTCTCAAATCACACACCTAGTTTCTGATATAGGTTCCTCTATTACGGGTTTATTTCTTTGTTGTATTGGGTGTTTTGTTAACAAGATGGCTAAACTTACCCCTTTGGAAGAGTCCCTTTTGAACCGTGACTCTAGTAGGGTAAGCAACAATTCTAATCCCAAAAATTTAACCAGTTATTCAAACGCTGGATTTTTCAGCATTCTTACTTTCTCATGGATGAGTCCACTAATAACTTTAGGAAGTAAGAAAACTTTAGACCATAAGGACCTTCCACTGCTTGCTATAAACGACAGTGCCTATGGGGCTTTTCCAACTTTTAGAAACAAGCTTGAGTCAGAGTGTGGGAGTGTGACCACTCTTAAGCTGGTCAAGGTGTTATTCTTCTCAACATGGCAAGGGATCCTTTTATCCGGCTCATTTGCATTCTTGTACACATGTGCTTCTTATGTTGGACCCTACCTTATTGACAACCTTGTTCAATACCTCAATGGGGAACACAAGGTTAAACTTGAAGGCTATATTTTGGCTATGGCATTTGTTGCTGCAAAGCTTGTGGAGTGTCTTTCACAGAGGCACTGGATGTTTAGGTTCCAGCAGGTTGGTGTTAGGATGCAATCAATGTTGGTGGCAATGATCTATGCTAAAGGTTTGACCCTTTCATGTCAATCAAAGGAGGGTTATGGTAGTGGGGAAATCATCAATTTATTGACTGTTGATGCTGAAAGGATTGGTGAATTTTGTTGGTACATGCATGAGCCATGGATGTGTGTTCTACAAGTTGCTTTGGCCTTGTTAATTCTCTACAGAAGTGTAGGGGTCGCTTCAGTGGCTGCTTTTGCTGCCACTGTAATTGTGATGTTGCTAAACCTTCCTGTAGCATCATTGCAAGAAAAGTTCCAAGGTAAGGTAATGGAGTTCAAAGATAAAAGAATGAAGGCAATGTCGGAGATTCTAATGAATATGAGGATTCTAAAACTGCAAGCATGGGAGATGAAGTTCTTATCAAAGATTATTCGGCTTAGGAAGACAGAAGAGACATGGCTAAAGAAATTTCTTGTTGGTACAGCAATTATTGAATTTCTTTTTTATAATGCCCCAACTTTTGTTGCTGTGGTTACTTTTGGCGCTTGTGCTCTTATAGGCATCCCACTTGAGTCAGGGAAGGTTTTATCTGCACTTGCAACATTCAGAATTCTCCAAATGCCCATCTATAGTCTTCCTGACACAATCTCAATGATTGTGCAAGCTAAGGTTTCCCTTAATAGGATTGCATCATTTCTTCGTCTAGATGACTTGCAGACTGATGTAGTGGAGAAGCTACCAAGGGGTAGTTCTGATGTAGCAATTGAATTAGTAGATGGAAATTTCTCTTGGGATTTATCTTCTGTTAATTCAACATTGAAAAACATAAATCTGAGAGTTTTTCATGGCATAAAGGTAGCTGTTTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCATGTATATTGGGTGAAGTACCAAAGCTATCTGGGACCCTAAAGGTTTGTGGAACAAAGGCTTATGTTGCTCAATCACCATGGATACAAAGTGGCAAAATAGAAGATAACATTTTGTTTGGCAAAGAGATGGACAGGGAAAAGTATGAGAAGGTGCTAGAAGCATGTTCCTTGACAAAAGACCTAGAGGTTCTACCATTTGGTGATCAAACCATTATTGGAGAGAAGGGAATCAATTTGAGTGGTGGACAGAAGCAAAGAGTGCAAATAGCTCGTGCTCTTTACCAAGATGCTGATATATATCTGCTTGATGATCCCTTCAGTGCTGTGGATGCTCATACAGGATCCCATCTCTTTAAGGAGTGTTTGCTTGGCCTTCTGAAAACAAAAACTGTGATATACATAACACATCAAGTAGAGTTCTTACCTGATGCTGATCTAATTTTGGTCATGAGAGAAGGAAGGATAACTCAATCAGGAAAATACAATGACATTCTTAGGTCAGGCACTGATTTTATGGAACTTGTAGGTGCACATAGAGCAGCTTTGTCTTCAGTTAAGTCCTTAGAGAGAAGGCCCACATTTAAAACATCAAGTATCACCATGGAGGAAAAAGATTCATTAAGTGATTTTGAACTTGAGCAAAACGTTGTAGACATAGACGATCAAAATGGAAAGTCAGATGATACAGTTGAGCCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGGGAAAAAGGTAGAGTTGGGTTTAAAGTCTACTGGAAATACATCACAACAGCTTATGGAGCAGCTCTTGTACCTTTTATATTACTTTCACAGACACTCATAGTGGTTCTCCAGATTGCAAGCAATTATTGGATGGCTTTGGCTACTCGTGTTTCAGCAACTGCTGAACCTGCTATTGGAAGCTTCACACTTATGGTTGTCTATGTTGCTTTGGCTATTGGAAGTTCCTTTTTCACCCTTGCCAGAGCAGTTCTTGCTGTGATAGCTGGATACAAGACAGCCACTATGCTCTTCAATAAAATGCATTTGTGCTTTTTTAGAGCACCAATGTCATTTTTTGATGCCACCCCAAGTGGGAGAATCCTTAATAGAGCTTCAACCGACCAAAATGCATTAGATATGACCATTCCAAATCTATTATGGGGATTTACCTTCTATCTGATTCAGCTCTTGGGAAATATTGCTGTGATGTCTCAAGCTACATGGCAGGTGTTGATAGTATTGATTCCTGTCATGGCAGCTTGCATATGGTACCAGCGATACTACTCAGCATCAGCAAGGGAATTGGCACGGTTAGTTGGTATATGCCAAGCTCCAGTTATACAACATTTTTCTGAAACAATTTCTGGATCAACAACCATAAGAAGTTTTGAGCAAGAATCAAGATTTGATGACATAAATATGAAATTGATAGACAAATATTCCCAACCCAAATTATACAGTGCTACTGCAATGGAATGGCTGAATTTCAGATTGGATATTTTATCCTCTACCTTATTTGCCTTCTGTTTGGTTTTCTTGATATCCTTTCCAAGTTCAATCACTGATCCTGGCATTGCGGGATTGGCTGTGACATATGGACTTAATCTTAATTCTATACAATTTGGTTTAATCTGGATGCTTTGCAATTTGGAGAACAAAATTATATCTGTAGAAAGAATACTTCAGTACACCTCCATCCCAAGTGAAGCTCCTCTTGTAATAAAAGACACCCAACCAGATCATTCTTGGCCATCATTTGGAGAAGTTCATATCCAAGATTTACAGGTTCGGTATGCTCCTCACTTGCCTCTCGTTTTACGTGGTCTTACTTGCACTTTTACTGCTGGAGCAAGAACTGGCATTGTGGGAAGAACAGGAAGTGGAAAATCAACTCTAGTGCAAACACTTTTTAGACTTGTTGAACCTGTTGCTGGACAAATATTGATAGATAACATTAACATCACTTTGATTGGAATTCATGATTTGAGGTCCAGACTAAGCATTATTCCTCAGGATCCAACAATGTTTGAAGGGACTGTAAGAAACAACCTGGACCCGCTGGAACAGTACACAGATGAACATATTTGGGAGGCTCTAGATATGTGCCAACTTGGAGATGAAGTAAGGAAGAAGGAAGGGAAGCTTGACTCCATAGTTACTGAGAATGGAGAAAATTGGAGTATGGGTCAAAGGCAATTGATTTGCCTCGGCCGTGTTCTACTTAAGAAAAGCAAGATCTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACAGCAACAGATAATATTATTCAGCAAACAGTTAAGCAACAGTTTTCAGAATGCACAGTCATTACCATTGCTCATAGAATAACTTCAATCCTTGATAGTGACATGGTTCTGTTTCTAAATCAAGGGTTTGTTGAGGAATATGATTCACCAAAGAAACTGCTAAAGAACAAATCTTCATCTCTTGCTCAATTAGTTGCAGAATACACAAGGAGGTCAAACTCTGGGTTTGGAAGTTGA 4440 0.3935 MELIFLLQPIFTRGVSASLHIVLLLVLVVSWLWEKVHVDHREKSERNGFHNTGFLYCQHSLVCSVVICVFNLVLCLLSYFYWYKHVGSEELVTILDLAIKTVAWVVVCLYLHVRKSNTQEPNFPCFLRVWFWVYAFVSCCCLVIDFVIYGKHVFSQITHLVSDIGSSITGLFLCCIGCFVNKMAKLTPLEESLLNRDSSRVSNNSNPKNLTSYSNAGFFSILTFSWMSPLITLGSKKTLDHKDLPLLAINDSAYGAFPTFRNKLESECGSVTTLKLVKVLFFSTWQGILLSGSFAFLYTCASYVGPYLIDNLVQYLNGEHKVKLEGYILAMAFVAAKLVECLSQRHWMFRFQQVGVRMQSMLVAMIYAKGLTLSCQSKEGYGSGEIINLLTVDAERIGEFCWYMHEPWMCVLQVALALLILYRSVGVASVAAFAATVIVMLLNLPVASLQEKFQGKVMEFKDKRMKAMSEILMNMRILKLQAWEMKFLSKIIRLRKTEETWLKKFLVGTAIIEFLFYNAPTFVAVVTFGACALIGIPLESGKVLSALATFRILQMPIYSLPDTISMIVQAKVSLNRIASFLRLDDLQTDVVEKLPRGSSDVAIELVDGNFSWDLSSVNSTLKNINLRVFHGIKVAVCGTVGSGKSTLLSCILGEVPKLSGTLKVCGTKAYVAQSPWIQSGKIEDNILFGKEMDREKYEKVLEACSLTKDLEVLPFGDQTIIGEKGINLSGGQKQRVQIARALYQDADIYLLDDPFSAVDAHTGSHLFKECLLGLLKTKTVIYITHQVEFLPDADLILVMREGRITQSGKYNDILRSGTDFMELVGAHRAALSSVKSLERRPTFKTSSITMEEKDSLSDFELEQNVVDIDDQNGKSDDTVEPKGQLVQEEEREKGRVGFKVYWKYITTAYGAALVPFILLSQTLIVVLQIASNYWMALATRVSATAEPAIGSFTLMVVYVALAIGSSFFTLARAVLAVIAGYKTATMLFNKMHLCFFRAPMSFFDATPSGRILNRASTDQNALDMTIPNLLWGFTFYLIQLLGNIAVMSQATWQVLIVLIPVMAACIWYQRYYSASARELARLVGICQAPVIQHFSETISGSTTIRSFEQESRFDDINMKLIDKYSQPKLYSATAMEWLNFRLDILSSTLFAFCLVFLISFPSSITDPGIAGLAVTYGLNLNSIQFGLIWMLCNLENKIISVERILQYTSIPSEAPLVIKDTQPDHSWPSFGEVHIQDLQVRYAPHLPLVLRGLTCTFTAGARTGIVGRTGSGKSTLVQTLFRLVEPVAGQILIDNINITLIGIHDLRSRLSIIPQDPTMFEGTVRNNLDPLEQYTDEHIWEALDMCQLGDEVRKKEGKLDSIVTENGENWSMGQRQLICLGRVLLKKSKILVLDEATASVDTATDNIIQQTVKQQFSECTVITIAHRITSILDSDMVLFLNQGFVEEYDSPKKLLKNKSSSLAQLVAEYTRRSNSGFGS* 1480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02639 1479 Gene3D - 584 845 IPR027417 -
Rops11g02639 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 916 1196 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops11g02639 1479 CDD ABC_6TM_ABCC_D2 914 1208 IPR044726 GO:0140359
Rops11g02639 1479 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 289 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops11g02639 1479 FunFam ABC transporter C family member 5 877 1214 - -
Rops11g02639 1479 FunFam ABC transporter C family member 5 588 835 - -
Rops11g02639 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1225 1459 IPR027417 -
Rops11g02639 1479 Pfam ABC transporter transmembrane region 916 1158 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops11g02639 1479 Pfam ABC transporter transmembrane region 289 556 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Rops11g02639 1479 ProSitePatterns ABC transporters family signature. 728 742 IPR017871 GO:0005524|GO:0016887
Rops11g02639 1479 CDD ABCC_MRP_domain2 1231 1451 - -
Rops11g02639 1479 SUPERFAMILY ABC transporter transmembrane region 913 1215 IPR036640 GO:0005524|GO:0016020
Rops11g02639 1479 Pfam ABC transporter 621 755 IPR003439 GO:0005524
Rops11g02639 1479 Gene3D - 1216 1469 IPR027417 -
Rops11g02639 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1233 1467 IPR003439 GO:0005524
Rops11g02639 1479 FunFam ABC transporter C family member 3 1216 1468 - -
Rops11g02639 1479 Pfam ABC transporter 1251 1398 IPR003439 GO:0005524
Rops11g02639 1479 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 214 1468 - -
Rops11g02639 1479 SUPERFAMILY ABC transporter transmembrane region 285 582 IPR036640 GO:0005524|GO:0016020
Rops11g02639 1479 CDD ABCC_MRP_domain1 603 803 - -
Rops11g02639 1479 SMART AAA_5 1259 1444 IPR003593 GO:0016887
Rops11g02639 1479 SMART AAA_5 630 803 IPR003593 GO:0016887
Rops11g02639 1479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 600 825 IPR027417 -
Rops11g02639 1479 Gene3D ABC transporter type 1, transmembrane domain 262 583 IPR036640 GO:0005524|GO:0016020
Rops11g02639 1479 Gene3D ABC transporter type 1, transmembrane domain 878 1214 IPR036640 GO:0005524|GO:0016020
Rops11g02639 1479 CDD ABC_6TM_ABCC_D1 290 577 IPR044746 GO:0140359
Rops11g02639 1479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 603 826 IPR003439 GO:0005524
Rops11g02639 1479 FunFam ABC transporter C family member 10 272 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02639 Rops-Chr11 45125596 45131821 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02639 603 849 Calmodulin-binding Proteins AT2G36910 29.588 9.97e-27 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02639 - K05666 gmx:106794105 2406.33