Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02635 ATGGATCTTCAAATCCTCTACTTAGCATCCATTTTCTCCCTTTTCATTTTTGTGTTCACGGCACACAAAATAGTGTCCAAGAAATATGATTCAACTCCAAATATACCACCTGGGCCATGGAAGTTACCTATCATAGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCGTCGGTTAAGAGATTTATCAACAAAATATGGACCGTTGATGCATCTGAAGCTTGGAGAGGTTTGTGCCATTGTGGTTTCATCCCCAGAATATGCAAGGGAAGTGATGAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCTATCCTAGCTTCAAAGATAATGTCTTATGATTCTCAGGGTATGTCTTTTGCACCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGTAGCTTAGAGCTATTAAGTTCAAAACGTGTCCAATCTTTCCGACCAATCAGAGAGGAAGAGTTCACTAATCTCATCAAATGGATTGCATCAAAAGAAGGATCACCCATCAATCTCACTAAAGAAGTGTTTTCAACTACAGCTACAATCACTTCGAGGACAGCCTTTGGGAAGGAATGCAGGGACAATAAAAAATTCATATCAGTGGTAAAGGAAGTCACAGAAGTTGCTGGAGGGTTTGACTTGGGGGATTTGTACCCTTCTGCTAAATGGCTACAGAAAATCTCCCGATTGAAGCCTACGCTTGAGAAGTTGCACCAACAAGCTGACCAGATACTGCAAAACATCATCAATGAGCATAGGAATGCCAAGTTAAGGGCCACAGAAGACCAGGGTGAGGTAGTGGGGGAAGATCTTGTAGACGTGCTGTTGAAGGACGAGTTTGGCTTGAGTGATGATAGTGTCAAGGCTGTGATCTTGGATATCTTTGTCGGTGGAACTGAGACATCATCTACTACCGTAATATGGGCAATGGCAGAGATGATTAAAAATCCAAGAGTAATGGAGAAGGTACAAGCTGAGGTAAGACAGGTATTTTTTAAAGAAGGAAAACCCCTTGAAAGTGGCATCGAGAAACTAAAATATTTAAAATCTGTTGTGAAAGAGACATTACGATTGCACCCTCCTGCTCCTCTTTTGCTTCCAAGAGAGTGTGGACAAGCTTGCCAGGTCAATGGGTATCATATACCAACAAAAAGCAAGGTAATAATCAATGCTTGGGCAATTGGAAGAGATCCAAATCATTGGACTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGAAAAATCTGTAGACCACACAGGCAATAATTTTGAGTTCATCCCATTTGGTGCTGGAAGAAGAATGTGCCCGGGTATGACATTTGGCATGATCAACGTTGAGTTTCCACTTGCGTTGTTGCTGTATCATTTTGATTGGAAACTTCCCAAGGGTAAGAAGAACGAAGATTTAGACATGACTGAGACGTTTGGGGCAGTAGTTACTCCAAAAGATGACCTTTACCTGATTCCCATCACCTACCTTCCTTAG 1494 0.4183 MDLQILYLASIFSLFIFVFTAHKIVSKKYDSTPNIPPGPWKLPIIGNIHNLVGSLPHRRLRDLSTKYGPLMHLKLGEVCAIVVSSPEYAREVMKTHDLIFASRPPILASKIMSYDSQGMSFAPYGDYWRQLRKICSLELLSSKRVQSFRPIREEEFTNLIKWIASKEGSPINLTKEVFSTTATITSRTAFGKECRDNKKFISVVKEVTEVAGGFDLGDLYPSAKWLQKISRLKPTLEKLHQQADQILQNIINEHRNAKLRATEDQGEVVGEDLVDVLLKDEFGLSDDSVKAVILDIFVGGTETSSTTVIWAMAEMIKNPRVMEKVQAEVRQVFFKEGKPLESGIEKLKYLKSVVKETLRLHPPAPLLLPRECGQACQVNGYHIPTKSKVIINAWAIGRDPNHWTEAERFYPERFIEKSVDHTGNNFEFIPFGAGRRMCPGMTFGMINVEFPLALLLYHFDWKLPKGKKNEDLDMTETFGAVVTPKDDLYLIPITYLP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02635 497 Gene3D Cytochrome P450 29 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 CDD CYP71-like 66 488 - -
Rops11g02635 497 PANTHER OS08G0105600 PROTEIN 59 495 - -
Rops11g02635 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Rops11g02635 497 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02635 497 FunFam Cytochrome P450 71D8 28 492 - -
Rops11g02635 497 Pfam Cytochrome P450 36 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02635 Rops-Chr11 45072648 45075274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02635 4 496 Cytochrome P450 AT3G26300 41.535 3.78e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02635 - K13267 gmx:100813216 778.859