Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02632 ATGCATCTGCAACTTGGTGAGGTCTTCTTCATTATTGTTTCCTCAGCAGAGTATGCTAGGGAGGTAATGAAAACCCATGATGTTATCTTTTCATCGAGACCTCCTTCTATAACCTCAGAGATAGTGTTTTATAATTCCACAGATATAGCCTTTTCACCTTATGGTGATTACTGGAGACAGCTTCGAAAGATTTGTACTATGGAGCTTTTAAGTATAAAACGTGTCCAATTTCATTGGCCAATCAGAGAGGAAGAGGTTACTAATCTCATCAAACGGATAGCTTCAGAAGAAGGATCAGTGATCAATCTTTCTCAAGCAGTTATATCACTGATGTACACTATCACTTCAAGGGCTGCCTTTGGCAAGAGATACAAGGAGCAAGAAGAGTTCATATCAGTGGTCTTCTTCATTATTGTTTCCTCAGCAGAGTATGCTAGGGAGGTAATGAAAACCCATGATGTTATCTTTGCATCGAGACCTCCTTCTATAACCTCAGAGATAGTGTTTTATGATTCCACAGATATAGCCTTTTCACCTTATGGTGATTACTGGAGACAGCTTCGAAAGATTTGTACTATGGAGCTTTTAAGTATGAAACGTGTCCAATCTCATTCGCCAATCAGAGAGGAAGAGGTTACTAATCTCATAAAACGCATTGCTTCAGAAGAAGGATCAGTCATCAATCTTTCTCAAGCAGTTATATCACTGATGTTCACTATCACTTCAAGGGCTGCCTTCGGTAAGAAATACAAGGAGCAAGAAGAGTTCATATCAGTGGTAAGAGAAGTTTTAAAGCTAGCTGGAGGGTTCTCAATTGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAACACCTCACTGGGATGCGGTCTAAGCTTGAGAAGTTACACCAAAAAGTAGATAGCATACTGGAGAATATCATCAATGACCATAAAGAGGCAAAGCCTAAAACCAAAGAAGGTCTAGTTGAAGGAGAGCAAGATCTGATTGATGTTCTCTTAAAATTTGAGGGTAGTAGCAATGATTTGGATTTTTGCTTAACTAGCAGAAATATCAAGGCTATAATCTTTGATGTCTTCACTGGTGGAAGTGACACTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGGATCCAAGAGTGTTGAAGAACGCACAAACTGAAGTGAGAGTAATATTCAAAAGGAATGGAAGGGCTGATGAAACTTCCATTGATGAACTCAAATACTTGAAAGCAGTCATCAAAGAGGTATTGAGATTACACCCTCCCGGTCCTCTTTTAATTCCAAGGGAGTGTGGAAGAGCATGTGAGATTAATGGTTATCACATCCCTGTCCAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATTATTGGACTGAACCAGAGAGGTTTTATCCTGAGAGGTTTATTGATAGCTCTATTGACTATAAAGGAACTAGTTTTGAGTACATCCCATTTGGAGCTGGAAGGAGAATCTGCCCAGGCATGAACTACGGTGTTGCACATGTTGAGTTGATCCTTGCATTGTTATTGTTTCACTTTGATTGGAGACTTCCGAATGGAATGAAAACTGAGGATTTGGACATGACTGAGCTATTTGGAGCGTCTGTCATAAGAAAAGATGACCTGTACTTGATTCCAATCATTTCTCCTTCTATGTTGGTAACTTGA 1692 0.3989 MHLQLGEVFFIIVSSAEYAREVMKTHDVIFSSRPPSITSEIVFYNSTDIAFSPYGDYWRQLRKICTMELLSIKRVQFHWPIREEEVTNLIKRIASEEGSVINLSQAVISLMYTITSRAAFGKRYKEQEEFISVVFFIIVSSAEYAREVMKTHDVIFASRPPSITSEIVFYDSTDIAFSPYGDYWRQLRKICTMELLSMKRVQSHSPIREEEVTNLIKRIASEEGSVINLSQAVISLMFTITSRAAFGKKYKEQEEFISVVREVLKLAGGFSIGDLFPSAKWLQHLTGMRSKLEKLHQKVDSILENIINDHKEAKPKTKEGLVEGEQDLIDVLLKFEGSSNDLDFCLTSRNIKAIIFDVFTGGSDTAATTINWAMAEMMKDPRVLKNAQTEVRVIFKRNGRADETSIDELKYLKAVIKEVLRLHPPGPLLIPRECGRACEINGYHIPVQSKVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGTSFEYIPFGAGRRICPGMNYGVAHVELILALLLFHFDWRLPNGMKTEDLDMTELFGASVIRKDDLYLIPIISPSMLVT* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02632 563 PANTHER OS08G0105600 PROTEIN 135 555 - -
Rops11g02632 563 CDD CYP71-like 134 550 - -
Rops11g02632 563 Gene3D Cytochrome P450 134 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506|GO:0016705
Rops11g02632 563 FunFam Cytochrome P450 71D8 132 554 - -
Rops11g02632 563 PRINTS P450 superfamily signature 361 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 SUPERFAMILY Cytochrome P450 2 130 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 Gene3D Cytochrome P450 1 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 144 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 413 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 350 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 370 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 454 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 236 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 Pfam Cytochrome P450 137 541 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 Pfam Cytochrome P450 3 130 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02632 563 SUPERFAMILY Cytochrome P450 134 553 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02632 Rops-Chr11 45005015 45008556 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02632 137 554 Cytochrome P450 AT3G26300 44.131 1.93e-122 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02632 - - gmx:100801936 603.594