Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02629 ATGGCAAAAGAGGTTTTGAAAACACATGATATCATCTTTACTAATAGGCCCCATATTCCTGTTTCCAGAATTGCTTACAATGCTACAGGCATTGCTTTCTCTCCATATGGAGGCCACTGGAGGCAATTAAGTAATATATGCACTACAGAGCTTTTAACTACAAAACGTGTGCAATCTTTCAGGTACATAAGAGAAGAGGAAGTGTCAGCATTCATTGAAACAATATCTTCAAGTGAAGGATCAATTGTCAATCTCAGTGAGAAGATTTTATCAATGACATATGGAATAATAGCAAGATCAGCTATTGGTAAAATATCTATGTACCAGCAAGAGTTAATATTAATTATTGAGAAAGCTATACACCTTGCTGGAGAACTCTCTGTTGCTGATCTCTATCCTTCAATTAGATTACTTCAAAAGTTCAGTGGGATGAAGGTTAAATCTGAAAAATTGATCCAAAGGCTTGATAAGATATTGGATAATATCATTGATGAGCACAAAAATAGGAAAAATGGCCAGAGTGAAGCATATCAAGAAGATTTAATTGATGTTCTTCTGAACTTTCAACAGCAAAAGGACTTGGAATATCCCTTGACTGATGACAATGTTAAAGCAGTCTTTCTGGATATGATCAGTGCTGGAACTGAAACATCATCAGCGGTTGTGGAATGGGCAATGTCAGAAATGGTGAAAAACCCAAAGGTGATGGAAAAAGCACAAGCAGAGGTGAGAAGGGTGTTTGGTAACAAGGGGAATGTGGATGAGACTAACATTCACCAACTAACATACTTAAAATCTGTCATCAAAGAAACCATGAGGCTAAACCCACCTTCACCATTGTTACTTCCTAGAGAAAGCAAGGAAGGATGTCAAATTAATGGATATGACATACCTGTTAAGTCCAGGGTCATCATCAATGCTTGGGCAATTGGAAGAGATCCCAAGTATTGGACTGAAGCTGAGAGGTTTAAGCCAGAGAGATTTTTTGATAGCCCAATAGATTACAAAGGCACACACTTTGAATTTATTCCATTTGGTGTTGGAAGAAGAATGTGTCCAGGCATTGCATTTACCATAGCTGACATTGAGATGCCACTTGCTCAGTTGATTTACCATTTTGATTGGAGGCTTCCCAATGGAATCAAGCATGAAGAATTTGACATGATTGAGTCACATGGGTTAACCACAAGAAGAAAAAATGGACTATGCTTGATTCCTATTAGTCATTGTCTCCCAACATAG 1242 0.3776 MAKEVLKTHDIIFTNRPHIPVSRIAYNATGIAFSPYGGHWRQLSNICTTELLTTKRVQSFRYIREEEVSAFIETISSSEGSIVNLSEKILSMTYGIIARSAIGKISMYQQELILIIEKAIHLAGELSVADLYPSIRLLQKFSGMKVKSEKLIQRLDKILDNIIDEHKNRKNGQSEAYQEDLIDVLLNFQQQKDLEYPLTDDNVKAVFLDMISAGTETSSAVVEWAMSEMVKNPKVMEKAQAEVRRVFGNKGNVDETNIHQLTYLKSVIKETMRLNPPSPLLLPRESKEGCQINGYDIPVKSRVIINAWAIGRDPKYWTEAERFKPERFFDSPIDYKGTHFEFIPFGVGRRMCPGIAFTIADIEMPLAQLIYHFDWRLPNGIKHEEFDMIESHGLTTRRKNGLCLIPISHCLPT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02629 413 CDD CYP71-like 1 402 - -
Rops11g02629 413 Pfam Cytochrome P450 1 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 FunFam Cytochrome P450 99A2 1 407 - -
Rops11g02629 413 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS P450 superfamily signature 213 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS P450 superfamily signature 343 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 306 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 202 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 222 248 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 265 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 352 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 1 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PRINTS E-class P450 group I signature 342 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Rops11g02629 413 Gene3D Cytochrome P450 1 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02629 413 PANTHER OS08G0105600 PROTEIN 1 409 - -
Rops11g02629 413 SUPERFAMILY Cytochrome P450 1 406 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02629 Rops-Chr11 44982977 44984810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02629 2 406 Cytochrome P450 AT3G26310 40.482 2.11e-111 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02629 - K23806 csin:114319007 517.694