Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02625 ATGGCCAAAGAAATAATGAAGACACATGACATCATCTTTGCAAATAGGCCTCATCTTCTTGCTGCAGATATCATTAGTTATGGTTCTAAAGGCATGAGCTTTTCCCCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTGCACGTTTGAGCTGCTAACTCCAAAGCGAGTTCAATCATTTCAATCAATTAGGGAAGAGGAGGCATCAAATCTTATCAAAGAGATAGGTTTGAATGAAGGGTCGTCTATTAATCTCAGTAAGATGATCAATTCATTCTCCTATGGCTTAACATCACGAGTAGCCTTAGGAGGCAAGTCCGAAGATCAAGAAGCATTCATAGATGTTATGAAAGATGTCTTAAAATTAGTTGCTGGTTTTTCTATAGCTGACCTGTTTCCATCCATTGAAGTGCTTCAAGTTTTGACAGGAATAAGGTCCAAAGCTGAGAAGGTCCATGAAGAAATAGATAGGATCCTTGAGAAAATTGTCAGAGATCACAGGGAAACAAGTTCAGAAACAAAGGAAAACAATGAAAAAGCAAGTGAAGACCTAGTTGATGTCCTACTAAGGCTTCAGAAGCAGAACAACCTGGAGCACCCTCTATCAGACAGTGTTATAAAAGCAAACATGTTGGATATCTTCAGTGCTGGAAGTGGTACCTCAGCCAAAACATTAGAGTGGGCAATGTCAGAACTTGTCAAAAATCCAAGGGTGATGGAAAGAGCACAAGCTGAGGTAAGAAGGGTCTTTGATGGAAAAGGGCATGTAGATGAAGCTAACCTCCATGAACTTAAATACATGAAGTCAGTGATCAAAGAAACATTGCGCTTACACATTCCTGTTCCCTTATTACTACCAAGGGAATGTAGTGAGAGATGCGAGATTAATGGGTATGAGATACCAGCTAAAAGTAAGGTCATAGTTAATGCTTGGGCAATTGGGAGGGATCCAAACTATTGGGTTGATGCTGAGAAGTTTTATCCTGAAAGGTTCCTTGATAGTTCAGTTGACTACAAAGGTGCAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGCACTACATTTGGCATTGCTAATGTTGAACTCTTGCTAGCAAATTTGCTTTTCCATTTTGATTGGAAGATGCCTAATGGGATTAAGCATGAAGAACTAGACATGACTGAATCATTTGGCTTGTCTGTAAGAAGAAAACATGATTTGTACTTGATTCCTACTATGTATCACTCATTTTCTAGTTGA 1257 0.3938 MAKEIMKTHDIIFANRPHLLAADIISYGSKGMSFSPYGSYWRQMRKICTFELLTPKRVQSFQSIREEEASNLIKEIGLNEGSSINLSKMINSFSYGLTSRVALGGKSEDQEAFIDVMKDVLKLVAGFSIADLFPSIEVLQVLTGIRSKAEKVHEEIDRILEKIVRDHRETSSETKENNEKASEDLVDVLLRLQKQNNLEHPLSDSVIKANMLDIFSAGSGTSAKTLEWAMSELVKNPRVMERAQAEVRRVFDGKGHVDEANLHELKYMKSVIKETLRLHIPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDPNYWVDAEKFYPERFLDSSVDYKGADFQFIPFGAGRRMCPGTTFGIANVELLLANLLFHFDWKMPNGIKHEELDMTESFGLSVRRKHDLYLIPTMYHSFSS* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02625 418 PRINTS E-class P450 group I signature 206 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 1 17 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 310 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 356 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 346 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 226 252 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS E-class P450 group I signature 269 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 Pfam Cytochrome P450 1 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS P450 superfamily signature 270 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS P450 superfamily signature 347 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 PRINTS P450 superfamily signature 217 234 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 Coils Coil 164 184 - -
Rops11g02625 418 PANTHER OS08G0105600 PROTEIN 1 414 - -
Rops11g02625 418 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02625 418 CDD CYP71-like 1 406 - -
Rops11g02625 418 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 349 358 IPR017972 GO:0005506|GO:0016705
Rops11g02625 418 FunFam Cytochrome P450 99A2 1 411 - -
Rops11g02625 418 SUPERFAMILY Cytochrome P450 1 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02625 Rops-Chr11 44965380 44967334 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02625 2 413 Cytochrome P450 AT3G26330 40.143 1.28e-114 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02625 - - gmx:100818000 729.554