Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02624 ATGGATCTTCAAATCCTCTACTTTACTTCCATTTTCTCCTTTTTCATTTTTGTTTTTATGGCACACAAAATAGTGACAAAAAAATCTGTCTCAACTCCAAATTTACCACCAGGGCCATGGAAGCTACCTATCATAGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCGTCGGCTAAGAGATTTATCAGCTAAATATGGACCCTTGATGCATCTGAAGCTTGGACAGGTTTCTGCTATTGTGGTTTCATCTCCTGAGTATGCTAGGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAACCAATCAGAGAGGAAGAGCTCACTAATCTCATCAAATGGATTGCTTCAAATGAAGGATCACCCATCAATCTCACTAAAGAAGTGTTTTCAACTACAGCTACAATCACTTCGAGGACAGCCTTTGGGAAGGAATGCAGGGACAATAAAAAATTCATATCAGTGGTAAAGGAAGCCTCAGAAGTTGCTGGAGGGTTTGACTTGGGAGATTTGTACCCTTCTGCTAAATGGCTTCAGAACATCTCCAGGTTAAAGCCTACACTTGAGAAGTTGCACCAACAAGCTGACCGGATAATGCAAAATATCATCAATGAGCATAGGGATGCCATGTTAAAGGCTACAAAAGACCAGGGGGAAGTAGTGAGGGAAGATCTTGTAGACGTGCTTTTGAAGGACGAGTTTTGCTTAAGTGATGATAGTGTCAAGGCTGTGATCTTTGATATCTTCGGTGGAGGAACAGAGACATCATCTACTACGATAACATGGGCAATGGCAGAAATGATTAAAAATCCAAGAGTAATGGAGAAGGCACAAGCTGAGGTAAGAGAGGTATTTGATAAAGAAGGAAAGCCCAATGAAAGTGGCATAGGAAAACTAAAATATTTAAAATCTGTTGTGAAAGAGACAATGAGATTACACCCTCCTGCTCCTCTTTTGCTTCCAAGAGAGTGTGGACAAGCTTGTGAAATCAATGGGTATCATATACCTCTGAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATCATTGGACTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTTCTGTAGACTACAAAGGTAATAATTTTGAGTTCATCCCATTTGGTGCTGGAAGAAGAATGTGCCCAGGCATGACATTTGGCTTGATCAACGTTGAGTTTCCACTTGCATTGTTGATGTATCATTTTGATTGGAAACTTCCCAATGGAATTAAAAATGAAGATCTGGACATGACTGAGACGTTTGGAACAGTAGTTGTTCGAAAAGATGATTTATACTTGATTCCCATACCTTATCATCCTTAG 1353 0.4043 MDLQILYFTSIFSFFIFVFMAHKIVTKKSVSTPNLPPGPWKLPIIGNIHNLVGSLPHRRLRDLSAKYGPLMHLKLGQVSAIVVSSPEYARELLSSKRVQSFQPIREEELTNLIKWIASNEGSPINLTKEVFSTTATITSRTAFGKECRDNKKFISVVKEASEVAGGFDLGDLYPSAKWLQNISRLKPTLEKLHQQADRIMQNIINEHRDAMLKATKDQGEVVREDLVDVLLKDEFCLSDDSVKAVIFDIFGGGTETSSTTITWAMAEMIKNPRVMEKAQAEVREVFDKEGKPNESGIGKLKYLKSVVKETMRLHPPAPLLLPRECGQACEINGYHIPLKSKVIVNAWAIGRDPNHWTEAERFYPERFIESSVDYKGNNFEFIPFGAGRRMCPGMTFGLINVEFPLALLMYHFDWKLPNGIKNEDLDMTETFGTVVVRKDDLYLIPIPYHP* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02624 450 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS P450 superfamily signature 305 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS P450 superfamily signature 252 269 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 Gene3D Cytochrome P450 25 440 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 241 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 261 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 304 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PRINTS E-class P450 group I signature 345 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 FunFam Cytochrome P450 99A2 88 446 - -
Rops11g02624 450 Pfam Cytochrome P450 98 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 Pfam Cytochrome P450 36 96 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02624 450 PANTHER OS08G0105600 PROTEIN 90 450 - -
Rops11g02624 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Rops11g02624 450 CDD CYP71-like 66 441 - -
Rops11g02624 450 SUPERFAMILY Cytochrome P450 36 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02624 Rops-Chr11 44957405 44964413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02624 4 448 Cytochrome P450 AT3G26300 39.130 3.21e-113 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02624 - K13267 gmx:100813216 684.485