Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02623 ATGGAGTTGGATCTCCAGGATATTACCTCACCAGCAATCTTATGCTTCTTTCTCTTGTTGTTCACAGTGATTACCACAATATGGAGATCAAAACCAAAGCCTAAGTTGCCACCAGGACCACCGAAACTACCTCTTATAGGGAACATGCACCAGCTTGGTGCTATGCCTCATCATGGCCTAGCAAAATTAGCACAGAAATATGGGCCTCTGATGCATATAAAACTTGGTGGACTTTCCATCATAGTGGTGTCTTCCCCTGGAATTGCCAAAGAAATAATGAAGACACATGACATCATCTTTGCAAATAGGCCTCAGCTTCTTGCTGCAGATATCATAACTTATGGTTCTAAGGGCATGACCTTTTCCTCTTATGGAAGTTATTGGAGGCAAATGAGAAAGATCTGCACGTTTGAACTACTAAGTCCAAAGCGTGTTGAATCATTTCAATCCATTAGGGAACAGGAGGCTTCAAATCTTGTCAAAGAGATAGGTTTGAGTGAAGGGTCCTCTATCAATCTCAGTAAGATGATCACTTCATTCTCATATGGCTTAACATCACGAGTAGCCTTAGGAGGCAAGTCCGAAGATCAAGAAGCATTCATAGATGTTATGAAAGATGTCTCAAAAATAGTTGCTGGTTTTTCTATAGCTGACCTTTATCCTTCCATTGAATTGCTTCAAGTTTTGACAGGAATAAGGTCCAAAGCTGAGAAGCTCCATCAAGAAATAGACAGGATCCTTGAGAAAATTGTCCGAGATCACAGGGAGACAAGTTCAGAAACAAAGGCAAACAATGAAAAAGAGGGTGAAGACCTAGTTGATGTCCTACTAAGGCTTCAGAAGCAGAACAACCTCGAGCATCCTCTATCTGACTGTGTTATCAAAGCAACCATGTTGGATATCTTCAGTGCTGGAAGTGGTACTTCAGCCAAAACCTTAGAGTGGGCAATGTCAGAACTAATCAAAAACCCAAGGGTAATGGAAAGAGCACAAGCTGAGGTAAGAAGGGTCTTTGATGGAAAAGGGTGTGTAGATGAAGCTAACCTCCATGAACTTAAATACATGAAGTCAGTAATCAAAGAAACATTGCGTCTACACATTCCTGTTCCATTATTACTACCAAGGGAATGCAGTGAGAGATGTGAGATTAATGGGTATGAGATACCAGCTAAGAGTAAGGTCATAGTTAATGCTTGGGCAATTGGGAGGGACTCAAACTACTGGATTGAAGCTGAGAAGTTTTACCCTGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGCAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGGAGGATGTGTCCTGGTACTACATTTGGCATTGCTAATGTTGAACTCTTGCTAGCAAATTTGCTCTTCCATTTTGATTGGAAGATGCCTAATGGGAACAAGCCTGAAGAACTAGACATGACTGAATCATTTGGCCTGTCTGTAAGAAGAATACATGATTTGTACTTGACTCCTTCTACCTATGTATCACACTCACCTGCTAATTGA 1524 0.4108 MELDLQDITSPAILCFFLLLFTVITTIWRSKPKPKLPPGPPKLPLIGNMHQLGAMPHHGLAKLAQKYGPLMHIKLGGLSIIVVSSPGIAKEIMKTHDIIFANRPQLLAADIITYGSKGMTFSSYGSYWRQMRKICTFELLSPKRVESFQSIREQEASNLVKEIGLSEGSSINLSKMITSFSYGLTSRVALGGKSEDQEAFIDVMKDVSKIVAGFSIADLYPSIELLQVLTGIRSKAEKLHQEIDRILEKIVRDHRETSSETKANNEKEGEDLVDVLLRLQKQNNLEHPLSDCVIKATMLDIFSAGSGTSAKTLEWAMSELIKNPRVMERAQAEVRRVFDGKGCVDEANLHELKYMKSVIKETLRLHIPVPLLLPRECSERCEINGYEIPAKSKVIVNAWAIGRDSNYWIEAEKFYPERFLDSSVDYKGADFQFIPFGAGRRMCPGTTFGIANVELLLANLLFHFDWKMPNGNKPEELDMTESFGLSVRRIHDLYLTPSTYVSHSPAN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02623 507 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops11g02623 507 CDD CYP71-like 66 493 - -
Rops11g02623 507 FunFam Cytochrome P450 71D8 29 497 - -
Rops11g02623 507 Gene3D Cytochrome P450 29 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 PANTHER OS08G0105600 PROTEIN 60 499 - -
Rops11g02623 507 Pfam Cytochrome P450 37 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02623 507 Coils Coil 229 249 - -
Rops11g02623 507 SUPERFAMILY Cytochrome P450 35 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02623 Rops-Chr11 44932972 44934922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02623 13 502 Cytochrome P450 AT3G48280 39.959 6.79e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02623 - - gmx:100818000 819.305