Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02620 ATGGGTCTTCCAACAATATACCCTTTAGCCCATTTTACCATTTTCCTCTTCATCATTGTGACACTAATACTATGGAGGAATCCCAAGAAAAATTACTCAATTCCAAATTTACCACCAGGGCCATGGAAGCTACCTATAGTAGGAAATATACCCCATCTTTTTGGCTCTCAACCACATAGAAAATTAAGAGAATTGGCAAAAAAATATGGACCCTTGATGCATCTGCAACTTGGTGAGGTCTTCTTCATTATTGTTTCCTCAGCAGATTATGCTAGGGAGGTATTGAAAACCCATGATGTTATCTTTGCATCGAGACCTCCTTCTATAACCTCAGAAGTGTTTTATAATTCCACAGATATAGCCTTTTCACCTTATGGTGCTTACTGGAGACAGCTTCGAAAGATTTGTACTATGGAGCTTTTAAGTATAAAACGTGTCCAATTTCATTGGCCAATCAGAGAGGAAGAGGTTACTAATCTCATCAAACGGATAGCTTCAGAAGAAGGATCAGTGATCAATCTTACTCAAGCAGTTATATCACTGATGTACACTATCACTTCAAGGGCTGCCTTTGGCAAGAGATACAAGGCGCAAGAAGAGTTCATATCAGTGGTAAGAGAAGTTTTAGAGCTAGCTGGAGGTTTCTACATAGGGGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCACTGGGATGAGGCCTAAGCTTGAGAAGTTACACCAAAAACTAGACCGAATAATGGAGAATATCATCAATGACCATTTAGAGGCAAAGTCAAGAAGCAAAGAAGGTCTAGTTGACGGAGAGGAAGATTTGATTGATGTTCTCTTAAAATTTGAGGATAGTAGCAGTAACCTGGATTTTCGCTTATCTAAAAGAAATATCAAGGCTATAATCATTGATATCTTCACTGGTGGAAGTGACACTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGACGAAGGATCCAAGAGTATTAAAGATAGCACAAGATGAAGTGAGAGAAATATTCGAAACGAGAGGAAGGGTTGATGAAACTTGCATTAATGAGCTCAAATACTTGAAAGCAGTCATCAAAGAGGTCCTGAGATTACACCCTCCTGCTCCTCTTTTACTTCCAAGGGAGTGTGGACAAGCTTGTGACATAAAAGGTTATCACATACCTGTCCAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATTATTGGACTGAACCAGAGAGCTTTTATCCTGAGAGGTTTATTGATAGTTCTATTGACTATAAAGGAATTAGTTTTGAGTACATTCCATTTGGTGCTGGAAGGAGAATTTGCCCAGGAATGAACTACGGTATTGCACATGTTGAGTTGGTCCTCGCATTGTTATTGTTTCACTTTGATTGGAGACTTCCCAATGGAATGAAAACTGAGGATTTGGACATGACTGAGCTATTTGGAGTTGTTGTCATTAAAAAAGCTGACCTGTACTTGATTCCAATTGCTTCTCCTTCTTTGCTTGTACATGAGCCACACAAGCAGAATCCATAA 1548 0.3953 MGLPTIYPLAHFTIFLFIIVTLILWRNPKKNYSIPNLPPGPWKLPIVGNIPHLFGSQPHRKLRELAKKYGPLMHLQLGEVFFIIVSSADYAREVLKTHDVIFASRPPSITSEVFYNSTDIAFSPYGAYWRQLRKICTMELLSIKRVQFHWPIREEEVTNLIKRIASEEGSVINLTQAVISLMYTITSRAAFGKRYKAQEEFISVVREVLELAGGFYIGDLFPSAKWLQNLTGMRPKLEKLHQKLDRIMENIINDHLEAKSRSKEGLVDGEEDLIDVLLKFEDSSSNLDFRLSKRNIKAIIIDIFTGGSDTAATTINWAMAEMTKDPRVLKIAQDEVREIFETRGRVDETCINELKYLKAVIKEVLRLHPPAPLLLPRECGQACDIKGYHIPVQSKVIVNAWAIGRDPNYWTEPESFYPERFIDSSIDYKGISFEYIPFGAGRRICPGMNYGIAHVELVLALLLFHFDWRLPNGMKTEDLDMTELFGVVVIKKADLYLIPIASPSLLVHEPHKQNP* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02620 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops11g02620 515 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 CDD CYP71-like 68 495 - -
Rops11g02620 515 Gene3D Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02620 515 FunFam Cytochrome P450 71D8 30 499 - -
Rops11g02620 515 PANTHER OS08G0105600 PROTEIN 61 501 - -
Rops11g02620 515 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02620 Rops-Chr11 44833676 44835349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02620 14 499 Cytochrome P450 AT3G26310 42.828 9.85e-138 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02620 - - gmx:100801936 678.322