Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02619 ATGGATCTTCCAACAATTTCCCCTTTGGCCCTTTTTTCCATTTTCCTCTTCATCATTTTGACAATAATACTATGGAGGAATCCCAAGAAAACTGACTCAATTCCAAATATACCACCAGGACCATGGAAGCTACCTATCGTAGGAAATATACCCCATCTTGTTGGCTGTCAACCACATAGAAAATTAAGAGAATTGGCTGAAAAATATGGACCCTTGATGCATCTGCAACTTGGTGAGGTCTTCTTCATTATTGTTTCCTCAGCAGAGTATGCTAGGGAGGTAATGAAAACCCATGATGTTATCTTTGCATCGAGACCTCCTTCTATAACCTCAGAGATAGTGTTTTATGATTCCACAGATATAGCCTTTTCACCTTATGGTGATTACTGGAGACAGCTTCGAAAGATTTGTACTATGGAGCTTTTAAGTATGAAACGTGTCCAATCTCATTGGCCAATCAGAGAGGAAGAGGTTACTAATCTCATAAAACGCATTGCTTCAGAAGAAGGATCAGTCATCAATCTTTCTCAAGCAGTTATATCACTGATGTTCACTATCACTTCAAGGGCTGCCTTCGGTAAGAAATACAAGGAGCAAGAAGAGTTCATATCAGTGGTAAGAGAAGTTTTAAAGCTAGCTGGAGGGTTCTCAATTGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAACACCTCACTGGGATGCGGCCTAAGCTTGAGAAGTTACACCAAAAAGTAGATAGCATACTGGAGAATATCATCAATGACCATAAAGAGGCAAAGTCTAGAACCAAAGAAGGTCTAGTTGAAGGAGAGCAAGATCTGATTGATGTTCTCTTAAAATTTGAGGGTAGTAGCAATGATTTGGATTTTTGCTTAACTAGCAGAAATATCAAGGCTATAATCTTTGATGTCTTCACTGGTGGAAGTGACACTGCAGCAGCTACCATTAACTGGGCAATGGCTGAGATGATGAAGGATCCAAGAGTGTTGAAGAACGCACAAACTGAAGTGAGAGTAATATTCAAAAGGAATGGAAGGGCTGATGAAACTTCCATTGATGAACTCAAATACTTGAAAGCAGTCATCAAAGAGGTATTGAGATTACACCCTCCCGGTCCTCTTTTACTTCCAAGGGAGTGTGGAAGAGCATGTGAAATTAATGGTTATCACATCCCTGTCCAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATTATTGGACTGAACCAGAGAGGTTTTATCCTGAGAGGTTTATTGATAGCTCTATTGACTATAAAGGAACTAGTTTTGAGTACATCCCATTTGGAGCTGGAAGGAGAATCTGCCCAGGCATGAACTACGGTGTTGCACATGTTGAGTTGATCCTTGCATTGTTATTGTTTCACTTTGATTGGAGACTTCCGAATGGAATGAAAACTGAGGATTTGGACATGACTGAGCTATTTGGAGCGTCTGTCATAAGAAAAGATGACCTGTACTTGATTCCAATCATTTCTCCTTCTATGTTGGTAACTTGA 1530 0.4013 MDLPTISPLALFSIFLFIILTIILWRNPKKTDSIPNIPPGPWKLPIVGNIPHLVGCQPHRKLRELAEKYGPLMHLQLGEVFFIIVSSAEYAREVMKTHDVIFASRPPSITSEIVFYDSTDIAFSPYGDYWRQLRKICTMELLSMKRVQSHWPIREEEVTNLIKRIASEEGSVINLSQAVISLMFTITSRAAFGKKYKEQEEFISVVREVLKLAGGFSIGDLFPSAKWLQHLTGMRPKLEKLHQKVDSILENIINDHKEAKSRTKEGLVEGEQDLIDVLLKFEGSSNDLDFCLTSRNIKAIIFDVFTGGSDTAAATINWAMAEMMKDPRVLKNAQTEVRVIFKRNGRADETSIDELKYLKAVIKEVLRLHPPGPLLLPRECGRACEINGYHIPVQSKVIVNAWAIGRDPNYWTEPERFYPERFIDSSIDYKGTSFEYIPFGAGRRICPGMNYGVAHVELILALLLFHFDWRLPNGMKTEDLDMTELFGASVIRKDDLYLIPIISPSMLVT* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02619 509 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PANTHER OS08G0105600 PROTEIN 61 501 - -
Rops11g02619 509 FunFam Cytochrome P450 71D8 30 500 - -
Rops11g02619 509 SUPERFAMILY Cytochrome P450 38 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 CDD CYP71-like 68 496 - -
Rops11g02619 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 Pfam Cytochrome P450 38 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02619 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02619 Rops-Chr11 44808750 44810444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02619 15 500 Cytochrome P450 AT3G26300 43.117 2.17e-139 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02619 - - gmx:100801936 699.123