Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02618 ATGGATCTTCAAATCCTCCACCCAACATCCATTTTCTCCCTCATCATTTTTGTGTTTATTGTGCACAAAATAGTGACCAAGAAATCTAACTCAGCTCCAAATTTACCACCGGGGCCATTGAAGTTACCTATTATAGGGAACATACACAACCTTGTTGGCTCACTTCCCCATCATCGGTTAAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAACTTGGAGAAGTTTCTTTCGTTGTGGTTTCATCCCCAGAGTATGCTAGGGAGGTGATGAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCTCTCCTAGCTACAAAGATGACTTATGATACTCTGGGTATGTCTTTGGCACCTTACGGTGATTATTGGAGACAGCTAAGGAAGATTTGTGCATCGGAGCTATTGAGCTCAAAACGTGTTCAATCTTTCCAACCAATAAGAGAAGAAGAGCTCACTAATCTCATCAAATGGATTGCTTCAAAAGAAGGGTCACCCATCAACATCACTAAAAAAGTGTTTTCAACTATTTCTACATTCACTTCAAGAACAGCCTTTGGTAAGAAATACAGAGACAATGAAAAATTCCTATCTGTGGTAAAAGAAGCCGTAGAGGTTGCTGGAGGGTTTAACTTGGGAGATTTGTACCCTTCTGCTAAGTGGCTTCAGAACATCTCTGGGTTGAAGTCTACGCTTGAGAAGTTGCACCAACAAGGTGACATGATAATGCAAAACATCATCAATGAGCATAGGGATGCCAAGTCAAGGGCCACACAAGACCAGGGGGAAGTAGTGAGGGAAGACCTTGTAGACGTGCTCTTGAAGGACGAGTTTGGCTTGAGTGATGATAGTGTCAAGGCTGTGATCTTGGATATCTTTACAGGTGGAAGTGAGTCATCATCTACTACCATAACATGGGCAATGGCAGAGATGATTAAAAATCCAAGAGTAATGAAGAAGGTACAAGCTGAGATAAGAGAGGCATTTGATAAAGAAGGAAAGCCTAATGAAAGTTGCATCGAGAAGCTAAAATATTTGAAATCTGTTGTGAAAGAGACAATGAGATTACACCCTCCTGCTCCTCTTTTGCTTCCAAGAGAGTGTGGACAAGCTTGTGAGATCAATGGGTATCACATACCTCATAAAAGCAAGGTAATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATCTTTGGACTGAGGCTGAGAGGTTTTATCCTGAGAGGTTCATTGAAAGTTCTGTAGACTACAAAGGCAATAATTTTGAATACATCCCATTTGGTGCTGGAAGAAGAATGTGCCCGGGTATGGCATTTGGCGTTATCAGTGTTGAGTTAGCACTTGCATTGTTGATGTATCATTTTGATTGGAAACTTCCCAACGGAATGAAAAATGAAGATTTGGACATGACTGAGACGTTTGGAGCAGCAGTTATTCGGAAAGATGATTTATACCTGATTCCCATCACTTATCATCCTTAG 1491 0.4111 MDLQILHPTSIFSLIIFVFIVHKIVTKKSNSAPNLPPGPLKLPIIGNIHNLVGSLPHHRLRDLSAKYGPLMHLKLGEVSFVVVSSPEYAREVMKTHDLIFASRPPLLATKMTYDTLGMSLAPYGDYWRQLRKICASELLSSKRVQSFQPIREEELTNLIKWIASKEGSPINITKKVFSTISTFTSRTAFGKKYRDNEKFLSVVKEAVEVAGGFNLGDLYPSAKWLQNISGLKSTLEKLHQQGDMIMQNIINEHRDAKSRATQDQGEVVREDLVDVLLKDEFGLSDDSVKAVILDIFTGGSESSSTTITWAMAEMIKNPRVMKKVQAEIREAFDKEGKPNESCIEKLKYLKSVVKETMRLHPPAPLLLPRECGQACEINGYHIPHKSKVIVNAWAIGRDPNLWTEAERFYPERFIESSVDYKGNNFEYIPFGAGRRMCPGMAFGVISVELALALLMYHFDWKLPNGMKNEDLDMTETFGAAVIRKDDLYLIPITYHP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02618 496 CDD CYP71-like 66 487 - -
Rops11g02618 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Rops11g02618 496 Gene3D Cytochrome P450 28 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 FunFam Cytochrome P450 71D8 28 491 - -
Rops11g02618 496 SUPERFAMILY Cytochrome P450 36 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02618 496 PANTHER OS08G0105600 PROTEIN 58 495 - -
Rops11g02618 496 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02618 Rops-Chr11 44797375 44799668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02618 11 494 Cytochrome P450 AT3G26300 42.515 1.77e-138 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02618 - K13267 gmx:100813216 748.429