Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02617 ATGGCTCTTCAAATCCATGACTTGTTAGCCCTTTTCACCTTTTTCCTGTCCATGATTGTTGCATTCAAAATAAGGAAGAATTTCAAAAAAACTACCTCAACTACAAATGTACCCCCAGGACCATGGAAACTACCTATTATAGGAAATATTCACAATCTTGTTACATCTTTGCCACATCGAAAATTAAGAGACCTAGCCAAAATATATGGACCCTTGATGCATCTACAACTTGGAGAGGTCTTCACCATTGTTGTTTCCTCAGCAGAATACGCTAGAGAGGTAATCAAGACTCATGATATTATCTTTGCATTAAGGCCTCATCTTCTAGCCACAGACATAGGGTCTTATGATTGCACAGATATAATATTTTCACCTTATGGTGATTACTGGAGACAGCTTAGGAAGATTTGTACTGTAGAGCTTTTAAGCACAAAACGGGTCAAATCTCTTTGGTCAATCAGAAAGGAAGAGATCACTACTCTCATCAAATGGATTGCTTCAAAAGAAGGATCAGAAGTCAATCTTACTGAAGCAGTTAATTCTATGATGTACACATTCACTTCAAAGGCTGCCTTTGGCAAGAAATACAAGGAGCAAGAAGAGTTCATAGCAGTGGCAAAACAAATTACAAAGCTTGCTGGAGGTTTCTACATAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCTGGGATGAGGCCTAAGCTTGAGAAGTTACACCAAAAATTAGACAGGATACTGGAGAATATCGTCAATGACCATAAAGAGGAAAGGCCAAGAGCTAAATGTTTGGTTGAAGGAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGACAGTAGTGGTGACCTGGATTTTTCCTTATCTTCAACTAATATCAAGGCTATAATCATGGATGTCTTCAGTGCTGGGAGTGAGACTGCAGCAACTGCCATTAATTGGGCAATGGCTGAGATGATAAAGAATCCAAGAATATTAAAGAAAGCACAAGCTGAAGTGTTAGAGGGATTTGATAGTAGAGGAAGAGTTGATGCAACTCCCATTGATGAGTTCAAATATTTGAAATTAGTCATCAAAGAGGCCTTAAGATTACACCCTCCTTTTCCTCTTATTTTAAGGGAATGTGGACAAGCATGTGAGATTAATGGCTATCACATACCTATCAAAAGTAGGCTCATAATCAGTGCTTGGGCAATTGGAAGGGATCCAAAATATTGGTCTGAACCAGAGAGGTTTTATCCTGAAAGGTTTATTGATAGCTCTATTGACTACAAAGGAACTGACTTTGAATATATCCCATTTGGAACTGGAAGGAGAATTTGCCCAGGCATTAACTATGCTATGGCAAATATTGAGCAGGTCCTTGCATTGTTATTGTATCATTTTGATTGGATACTTCCCAATGGAATGAAAAATGAGGACTTGGACTTGACAGAGGAATTTGGAGCTACTGTAACAAGAAAAGATGATCTATACTGGATTCCCATAGCTTCTCATTCTTTGCTTGAAACATAA 1524 0.3832 MALQIHDLLALFTFFLSMIVAFKIRKNFKKTTSTTNVPPGPWKLPIIGNIHNLVTSLPHRKLRDLAKIYGPLMHLQLGEVFTIVVSSAEYAREVIKTHDIIFALRPHLLATDIGSYDCTDIIFSPYGDYWRQLRKICTVELLSTKRVKSLWSIRKEEITTLIKWIASKEGSEVNLTEAVNSMMYTFTSKAAFGKKYKEQEEFIAVAKQITKLAGGFYIGDLFPSAKWLQNLSGMRPKLEKLHQKLDRILENIVNDHKEERPRAKCLVEGEEDLIDVLLKFEDSSGDLDFSLSSTNIKAIIMDVFSAGSETAATAINWAMAEMIKNPRILKKAQAEVLEGFDSRGRVDATPIDEFKYLKLVIKEALRLHPPFPLILRECGQACEINGYHIPIKSRLIISAWAIGRDPKYWSEPERFYPERFIDSSIDYKGTDFEYIPFGTGRRICPGINYAMANIEQVLALLLYHFDWILPNGMKNEDLDLTEEFGATVTRKDDLYWIPIASHSLLET* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02617 507 Gene3D Cytochrome P450 30 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops11g02617 507 PANTHER OS08G0105600 PROTEIN 61 500 - -
Rops11g02617 507 CDD CYP71-like 69 494 - -
Rops11g02617 507 Pfam Cytochrome P450 38 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02617 507 FunFam Cytochrome P450 71D8 30 498 - -
Rops11g02617 507 SUPERFAMILY Cytochrome P450 38 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02617 Rops-Chr11 44789931 44792013 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02617 8 498 Cytochrome P450 AT3G26300 40.040 3.14e-127 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02617 - - gmx:100801936 677.552