Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02616 ATGGCTCTTCAAATCCATGACTTGTTAGCCCTTTTCACCTTTTTCCTGTCCATGATTGTTGCATTCAAAATAAGGAAGAATTTCAAAAAGACTACCTCAACTACAAATGTACCCCCAGGACCATGGATTATACCTATTATAGGAAATATTCACAATCTTGTTACATCTTTGCCACATCGAAAATTAAGAGACCTAGCAAAAATATATGGACCCTTGATGCATCTACAACTTGGAGAGGTCTTCACCATTGTTGTTTCCTCAGTAGAGCATGCTAGAGAGGTTTTGAAAACCCATGATATCAACTTTGCATCAAGGCCTCAACTTCTAGCCACAGACATAGTGACTTATGGTTCTAAAGATATAACCTTTTCACCTTATGGTGATTACTGGAGGCAGCTTAGGAAGATTTGTACTATAGAGCTTTTAAGCACAAAACAGGTCAAATCTCACTGGCCAATCAGAAAGGAAGAAATCACTACTCTCATCAAATGGATTGCTTCAAAAGAAGGATCAGAAGTCAATCTAACTGAAGCAGTTAATTCTATGATGTATACATTTACTTCAAAGACTGCCTTTGGGAAGAAATACAAGGAGCAAGAAGAGTTCATATCAGTGGTAAAAGTTGTTTTCAAGCTAACTGGAGGTTTCTACATTGGAGATTTGTTTCCTTCAGCTAAATGGCTTCAAATCCTCACTGGGATGGGGACTAAGCTTGAGAAGTTACGCCAAAATTTAGACAGGATACTGGAAAATATCATCAATGATCATAAAGAGGCAAGGTCTAGAGCTAAAGATGGTTTGGTTGAAGCAGAGGAAGAAGATCTGATTGATGTTTTCTTAAGATTTGAGGACAGTCACAGTGACCTGGATTTTTGCATAACTTTAGATACTATCAAGGCTGTAATCTTCGATGTCTTCAGTGCTGGGAGTGAGACAGCAGCATCTACCATTAACTGGGCAATGGCAGAGATGATAAAGAACCCAAGAGTATTGGAAAAAGCACAAGATGAAGTGAGAGAGGGATTCAATAGGAGAGGAAGGGTTGATGAAACTGCCATTGAAGATCTCAAATATTTGAAATCAGTCATCAAAGAGGTCCTAAGATTACACCCTCCAGCTCCTCTTCTTCTTCCAAGGGAATGTAGACAAGCCTGTGAGATTAATGGCTATCACATACCTATCAAAAGTAGGATCCTAGTCAATGCTTGGGCAATTGGAAGGGATCCAAAATATTGGACTGAACCAGAGAGGTTTTGTCCTGAAAGGTTTATGGATAGCTCTATTGACTACAGAGGAACTAATTTTGAGTATATCCCATTTGGTTCTGGAAGGAGAATTTGTCCAGGCATAAACTATGGTATTGCAAATGTTGAGCATGTCCTTGCATTGCTATTGTATCATTTTGATTGGAGGCTTCCCAAAGGAATGAAGAATGAGGACTTGGACATGACTGAGGAATTTGGAATTAGCATGTCAAGAAAAGATGACCTATTCTTGATTCCCATAGCTTCTCCTACTTTGCTTGCAACATAA 1533 0.3894 MALQIHDLLALFTFFLSMIVAFKIRKNFKKTTSTTNVPPGPWIIPIIGNIHNLVTSLPHRKLRDLAKIYGPLMHLQLGEVFTIVVSSVEHAREVLKTHDINFASRPQLLATDIVTYGSKDITFSPYGDYWRQLRKICTIELLSTKQVKSHWPIRKEEITTLIKWIASKEGSEVNLTEAVNSMMYTFTSKTAFGKKYKEQEEFISVVKVVFKLTGGFYIGDLFPSAKWLQILTGMGTKLEKLRQNLDRILENIINDHKEARSRAKDGLVEAEEEDLIDVFLRFEDSHSDLDFCITLDTIKAVIFDVFSAGSETAASTINWAMAEMIKNPRVLEKAQDEVREGFNRRGRVDETAIEDLKYLKSVIKEVLRLHPPAPLLLPRECRQACEINGYHIPIKSRILVNAWAIGRDPKYWTEPERFCPERFMDSSIDYRGTNFEYIPFGSGRRICPGINYGIANVEHVLALLLYHFDWRLPKGMKNEDLDMTEEFGISMSRKDDLFLIPIASPTLLAT* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02616 510 Gene3D Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 CDD CYP71-like 69 497 - -
Rops11g02616 510 SUPERFAMILY Cytochrome P450 38 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 Pfam Cytochrome P450 38 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PANTHER OS08G0105600 PROTEIN 61 502 - -
Rops11g02616 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Rops11g02616 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02616 510 Coils Coil 231 273 - -
Rops11g02616 510 FunFam Cytochrome P450 71D8 30 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02616 Rops-Chr11 44773869 44775699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02616 8 501 Cytochrome P450 AT3G26310 42.231 2.83e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02616 - - gmx:102665189 671.389