Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02610 ATGTCCCATGGAGGAAGGGTGGGTTCTGATCCCCGTGCTTCATCGATGCTGAGGCTTCCTCGCTATTGTCGTGCTGAGGGTTGCAAGAACAACATAGATCATCCAAGATCAAGACCACTGAAGGATTTCAGGACCCTTCAAACACACTACAAGAGGAAGCATGGAAGACCCCTCAAGGATCATGTTCATGCCTTTGGTGATGGTCACGCTCCACACACCATGGAGAGTTGTGATCAGCTGGGAGAAGAACAAGAATTATTAGAAGAAGAAGAAGATGATGATGATGAAATCTTATCTAATTAA 303 0.4554 MSHGGRVGSDPRASSMLRLPRYCRAEGCKNNIDHPRSRPLKDFRTLQTHYKRKHGRPLKDHVHAFGDGHAPHTMESCDQLGEEQELLEEEEDDDDEILSN* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02610 100 PANTHER ZINC FINGER PROTEIN WIP2 13 55 IPR043584 GO:0003700|GO:0010468
Rops11g02610 100 MobiDBLite consensus disorder prediction 81 100 - -
Rops11g02610 100 MobiDBLite consensus disorder prediction 51 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02610 Rops-Chr11 44639657 44640084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02610 13 75 C2H2 Transcription Factor Family AT1G13290 50.476 1.19e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02610 - - aprc:113870355 113.235