Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02593 ATGGCCAGCAATGGTGCAAAGGAACCATTGCTGTCATGGTCACTGGATCCTGCAGCTCAAAAGGCTAACAAGCAGTTAAGAAAGAGAAAGTATCTCCGTTCCAAAAGTGCTCCTCTTGCTAATCTTGCCCCTCCTGAGACTAATGGAAATAGATCAATTCCACGTTTTAAGTCCATATTTCGGAAATTGAATCCAAGCTTTGGAAAAGTGGCTATATACTTTGCAGTGTATTTAGGTGTAGGAGTTGTAGTCTTCTACCTTTTCAGGAACCAGATCACGGGGAAGAAAACAGATGGTGTTCTTGATGCTTTATACTTTACAATTGTGACAATGACCACTGTTGGGTATGGAGACCTTGTGCCCAATAGTACCCTTACAAAACTACTAGCCTGTGCTTTTGTTTTCACTGGAATGACATTGGTTGGACTAATCCTAACCAAAGCAGGAGATTACTTGGTTGAGAAACAGGAAGTTTTGCTAGTTAAAGCTATGAACATGGGCCAAAAAGTTGGTCCAACTGGAATTTTAAAGGAGGTTGAAATCAATAAAACAAGATTCAAATTTTCGCTAATCTTCTTCCTTCTTTTGATCCTCATTGCTACAGGGACAATTTTCTTGGTCACTGTTGAGAGTTTGGATTTTGTTGATGCCTTCTACTGTGTTTGTTCTACATTTACAACCCTGGGTTATGGAGACAAAAGTTTCTCAACTCAAGCAGGAAGAATATTTGCAGTGTTTTGGATATTGGCAGGTACTATTTGTTTAACTCAGCTTTTCCTCTGCATTGCTGAGTTAAACACTGAAAGCAAACAGAAGGAAATTGTCAAATGGGTTCTTACAAGGAAAATGACCAATTTAGATTTGGAGGCAGCAGATCTTGATGAGGATGGAACTGTTGGGGCTGCTGAATTCATTATTTTTAAGCTCAAAGAAATGGGGAAGATTAGTCAAGAAGACATTTCACTTCTCTTGCAGGAATTTGAAGAGCTTGACATTGATCAGTCTGTTGTTGCATTCAAGGGCTGCAAGGGGAGAGTTTCCAACCTAGAGGATAAACATTAA 1062 0.3955 MASNGAKEPLLSWSLDPAAQKANKQLRKRKYLRSKSAPLANLAPPETNGNRSIPRFKSIFRKLNPSFGKVAIYFAVYLGVGVVVFYLFRNQITGKKTDGVLDALYFTIVTMTTVGYGDLVPNSTLTKLLACAFVFTGMTLVGLILTKAGDYLVEKQEVLLVKAMNMGQKVGPTGILKEVEINKTRFKFSLIFFLLLILIATGTIFLVTVESLDFVDAFYCVCSTFTTLGYGDKSFSTQAGRIFAVFWILAGTICLTQLFLCIAELNTESKQKEIVKWVLTRKMTNLDLEAADLDEDGTVGAAEFIIFKLKEMGKISQEDISLLLQEFEELDIDQSVVAFKGCKGRVSNLEDKH* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02593 353 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
Rops11g02593 353 Gene3D - 174 293 - -
Rops11g02593 353 Gene3D - 65 158 - -
Rops11g02593 353 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 100 321 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops11g02593 353 SUPERFAMILY Voltage-gated potassium channels 59 159 - -
Rops11g02593 353 PRINTS Two pore domain K+ channel signature 226 235 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops11g02593 353 PRINTS Two pore domain K+ channel signature 109 137 IPR003280 GO:0005267|GO:0016020|GO:0071805
Rops11g02593 353 Pfam Ion channel 194 265 IPR013099 -
Rops11g02593 353 Pfam Ion channel 73 153 IPR013099 -
Rops11g02593 353 SUPERFAMILY Voltage-gated potassium channels 182 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02593 Rops-Chr11 44358070 44360846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02593 1 335 Ion Channels AT5G55630 55.233 4.01e-132 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02593 K05389 - gmx:100777388 468.774