Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02581 ATGGAAAATTTCTCAGGTGAGGAGGAATACATCTTTCGTAGCCAATATTCACCTGTCCCTGTTCCTGACAATGTGACATTGCCGGAATTTGTACTCCAAGATGCTGAATTATATGGTGATAAACTTGCATTTGTGGATGCTGTGACTGGAAAAGGGATCACTCATAATGAGGTGGTGAGGGAAACAAAAAGGTTTTCAAAGGCCTTAAGATCTCTTGGTTTGAGAAAAGGGCATGTTGTGATTGTGGTACTTCCAAATGTGGTAGAGTATGCCATTGTTGCTTTGGGGATTATGGCTGCTGGTGGGGTGTTCTCAGGGGCAAATCCAACATCACATGTATCAGAACTTAAGAAACAGGCAGAGTCTGCTGATGCCAAGTTAATTATCACAAATAGCACAAACTATGAAAAGGTGAAAGGTCTAGAGTTACCTGTTATTGTGCTGGGAGATGAACTTGAAGGTGCTATGAATTGGAACAATCTGCTTGAAGCAGCAGACCGGGCTGGTGATGATGTGATCAAGGAGCCTATTCATCAGAATGATCTTTGTGCCATGCCATTCTCATCAGGAACCACAGGAATGTCAAAGGGTGTGATGCTTACTCACAGAAATCTAGTAGCTAATCTTTGCTCTACACTCTTTGGTGTAGGGACAGAAATGAGGGGTCAGGTCACCACACTAGGCTTAATTCCCTTCTTTCACATTTATGGCACCACTGGAATATGTTGTGCCACTATTAGGAACAAAGGGAAAGTTGTGGTGATGGGAAGATATGAGTTGAAAACATTTCTTAATGCCTTGATCATACATGAGGTCACATTTGCACCTATTGTGCCTCCAATTATTCTCAGCTTGGTGAAGAATCCCATAGTAGATGAATTTGATCTCAGCAAGCTTAAACTCCAGGCCATTATGACTGCAGCAGCACCACTTGCACCTGAACTGCTTAATGCATTTGAACACAAGTTCCCTAGCGTTCTTGTCCAAGAGGCATATGGACTTACTGAGCACAGCTGCATCACACTCACCCATGCACAAAAAGGATTGAGAAATCCGCATAAAAATTCAGTTGGGTTCATCCTCCCAAATTTGGAAGTCAAGTTTGTTGATCCTGATACAGGTAGATCCCTCCCCAGGAGCACACCCGGAGAACTCTGTGTAAGAAGCCAATGTGTAATGCAAGGTTATTATAAACAGGTGGATGAGACTGCCCAGACAATTGACAAGAATGGATGGCTTCACACTGGTGACATAGGATACATAGATGATGAAGAAAATGTTTTTATTGTTGATCGTATGAAGGAGTTGATTAAATACAAAGGCTTCCAAGTTGCACCTGCAGAGTTAGAAGCTATTTTGCTGTCCCATCCCTCGGTTGAAGATGCAGCTGTTGTGCCATTACCAGATGAAGAGGCAGGGGAAATCCCGGCAGCAAGTGTTGTTTTGAGCCCAGGAGCAAAAGAGAATGAAGAGGACATTATGAACTATGTTGCCTCCAATGCTGCTCATTACAAGAAAGTGAGAGTGGTGCACTTTGTGGAAGCAATACCAAAATCACATTCTGGAAAAATAATGAGAAGGCTTATCAAAGAGAAGATGGTGGAAAAGATGAAGACAAATTCCACAGCAAAATCCAACACTTTCTGA 1647 0.4256 MENFSGEEEYIFRSQYSPVPVPDNVTLPEFVLQDAELYGDKLAFVDAVTGKGITHNEVVRETKRFSKALRSLGLRKGHVVIVVLPNVVEYAIVALGIMAAGGVFSGANPTSHVSELKKQAESADAKLIITNSTNYEKVKGLELPVIVLGDELEGAMNWNNLLEAADRAGDDVIKEPIHQNDLCAMPFSSGTTGMSKGVMLTHRNLVANLCSTLFGVGTEMRGQVTTLGLIPFFHIYGTTGICCATIRNKGKVVVMGRYELKTFLNALIIHEVTFAPIVPPIILSLVKNPIVDEFDLSKLKLQAIMTAAAPLAPELLNAFEHKFPSVLVQEAYGLTEHSCITLTHAQKGLRNPHKNSVGFILPNLEVKFVDPDTGRSLPRSTPGELCVRSQCVMQGYYKQVDETAQTIDKNGWLHTGDIGYIDDEENVFIVDRMKELIKYKGFQVAPAELEAILLSHPSVEDAAVVPLPDEEAGEIPAASVVLSPGAKENEEDIMNYVASNAAHYKKVRVVHFVEAIPKSHSGKIMRRLIKEKMVEKMKTNSTAKSNTF* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02581 548 Gene3D - 9 434 IPR042099 -
Rops11g02581 548 Pfam AMP-binding enzyme 34 439 IPR000873 -
Rops11g02581 548 SUPERFAMILY Acetyl-CoA synthetase-like 15 535 - -
Rops11g02581 548 Pfam AMP-binding enzyme C-terminal domain 448 523 IPR025110 -
Rops11g02581 548 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Rops11g02581 548 FunFam 4-coumarate--CoA ligase 2 435 536 - -
Rops11g02581 548 Gene3D - 435 538 IPR045851 -
Rops11g02581 548 CDD 4CL 21 527 - -
Rops11g02581 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 532 - -
Rops11g02581 548 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02581 Rops-Chr11 44113587 44116938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02581 7 534 Monolignol Biosynthesis Gene Families AT1G62940 74.200 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02581 K01904 - gmx:100811418 962.214