Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02532 ATGCCTGGAACCTTAAGGAATCTGTCACTTTCTCCCAAAATCTTCTTCTTCACCTTACTTCTCTCATTAAACTTTATTTTCTTTCCATGTTGTTACTCCCTTGATGAACAAGGCCAAGCTCTTTTAGCATGGAAGAACAGTTTAAACAGTACTATAGATGCATTAGCATCATGGAATCCTTCATCTTCAACCCCATGCAACTGGTTTGGGGTGTTTTGCAACTCACAAGGAGATGTGATAGAGATAAACTTGAAATCAGTGAGCTTACAAGGCTCATTACCTTCAAATTTTCAATCTCTCAAGTCCTTGAAGATTCTCATCCTCTCATCAACCAACATCACAGGCTGGATTCCAAAAGAGATTGGAGAATATCAAGAGCTCATCTTTGTTGATCTCAGTGGAAATTCTCTTTTTGGTGAAATCCCAGAAGAAATTTGCAAGCTAAGCAAATTACAGAGTTTATCTCTCCATACAAACTTCCTCGAAGGAAATATTCCATCCAACATTGGAAATCTATCAAGTCTTGTGAACTTGACACTCTATGACAATCACTTGAGTGGTGAAATTCCAAAGAGTATTGGCTCCTTAAGCAAGCTTCAAGTATTCAGAGCAGGTGGCAATAAAAATCTCAAGGGTGAGATCCCATGGGACATTGGAAACTGCACCAACTTGGTCATTTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCTTCAATTGGAATGCTGAAAAGAATCAAGACAATAGCCATTTACACAACTCTATTGTCAGGCTCCATTCCAGAAGAGATTGGCAATTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCTATCTCAGGTTCAATCCCAAGCCAAATTGGAGAACTCAGCAAGCTCAAGAGTCTACTTTTATGGCAAAACAATATAGTTGGTACAATCCCAGAAGAGCTTGGAAGCTGCAAAGAGATCCGAGTCCTAGACTTATCAGAAAATCTTCTTACAGGAAGCATACCAAGAAGTTTTGGTCAGCTTTCAAATCTCCAAGAGCTTCAACTAAGTGTCAATCAGCTCTCAGGTGTAATACCTCCAGAGATTTCAAATTGCACTTCTCTGATTCAACTTGAAGTTGACAACAATGCTCTCTCTGGTGAGATTCCTGATCTTATTGGCAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTAACAGGAAAAATCCCAGATAGTCTTTCAGAGTGCCAAGACCTTCAGGCACTTGATCTGTCTTATAACAATTTGATTGGTCCAATTCCCAAACAATTATTTGGGTTGAGGAATCTCACCAAACTTCTGCTTCTTTCCAATGATTTATCAGGCTTTATACCACCTGATATAGGCAACTGTACAAACCTCTACAGGCTGCGGTTGAATCACAATAGACTTGCAGGTAAGATTCCACCTGAGATTGGCAACTTGAAGAGTTTGAATTTTGTGGATATGAGCAGCAATCATCTTGTTGGGGAGATTCCTTCAACACTATCTGGATGTCAAAATCTTGAGTTTCTGGACCTTCATTCCAATAGTCTCACAGGTTCTGTTCCAGATTCTCTGCCCAAAAGCCTTCAGTTGATTGACTTGTCAGAAAACAGGCTCACAGGTGCATTGAGTCACACCATTGGTTCATTGAATGAGTTAACCAAACTCAGCCTGGGAAAGAATCAACTAAGTGGAAAAATCCCAGCAGAGATCTTATCTTGCGCTAAGCTACAACTGCTAGACTTGGGAAGCAACAGTTTCACTGGAGAAATACCAAAGGAAGTTGGTCTAATTCCTTCATTGGAAATCTCTCTCAATCTTAGCTGCAACCAGTTTTCTGGTGAAATTCCATCTCAGTTCTCTAGTCTTAGCAAGCTAGGTGTGCTTGATCTCTCACACAACAAGCTCTCAGGGAATTTAGATGCTCTCTCTGACCTTCAGAATCTTGTTTCCTTAAATGTTTCCTTCAATAGTTTCTCTGGTGAGTTGCCTAACACCCCTTTCTTCCATAAACTCCCTCTCAGTGATCTTGCCGAAAATCAAGGTCTCTACATTGCTGGGGGTGTTGTAACTCCTGCTGAAGCCAAAGGTCATGCCAGATCAGCTATGAAGTTTATCATGTCCATTCTGTTAAGCACTAGTGCAATACTAGTGCTGCTCACAATTTATGTCTTGGTTCGCGCTCATATAACCAATAAGGTCCTCATGGAAAATGAAAACTGGGAGATGGTTTTGTATCAGAAGTTTGAATTCTCTGTTGATGACGTTGTCATGAATTTGACATCAGCCAATGTGATTGGCACTGGAAGTTCTGGAGTTGTGTACAAGCCTATCACTGAGAAGAGTGATGTGTATAGTTTTGGTATGGTTCTACTTGAGGTCTTAACAGGAAGGCACCCATTAGACCCAACTTTACCAGGGGGTGCACACTTGGTTCAATGGGTTAGGAACCACTTAGCTAGCAAAGGAGACCCTTCTGACATTCTTGATACAAAGCTTAGAGGGAGGGCTGACCCTACCATGCATGAAATGCTACAAACTCTAGCTGTGTCATTTCTATGTGTAAGCACAAGAGCTGATGACCGTCCAGCAATGAAGGATGTTGTTGCAATGCTCAAGGAAATTAGACCTGTTGAGACATCAAGGGGAGACCATGATGTATTGAAAGGAGGTTTAACATCACATAATTCACCACCACCTCCTAAGAATGTAGTTTCACATGGATCTTCTACATGTTCCTATAATTTCTCAGATGATTCAATCAGTTGA 2784 0.4106 MPGTLRNLSLSPKIFFFTLLLSLNFIFFPCCYSLDEQGQALLAWKNSLNSTIDALASWNPSSSTPCNWFGVFCNSQGDVIEINLKSVSLQGSLPSNFQSLKSLKILILSSTNITGWIPKEIGEYQELIFVDLSGNSLFGEIPEEICKLSKLQSLSLHTNFLEGNIPSNIGNLSSLVNLTLYDNHLSGEIPKSIGSLSKLQVFRAGGNKNLKGEIPWDIGNCTNLVILGLAETSISGSLPSSIGMLKRIKTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGSIPSQIGELSKLKSLLLWQNNIVGTIPEELGSCKEIRVLDLSENLLTGSIPRSFGQLSNLQELQLSVNQLSGVIPPEISNCTSLIQLEVDNNALSGEIPDLIGNLRSLTLFFAWQNKLTGKIPDSLSECQDLQALDLSYNNLIGPIPKQLFGLRNLTKLLLLSNDLSGFIPPDIGNCTNLYRLRLNHNRLAGKIPPEIGNLKSLNFVDMSSNHLVGEIPSTLSGCQNLEFLDLHSNSLTGSVPDSLPKSLQLIDLSENRLTGALSHTIGSLNELTKLSLGKNQLSGKIPAEILSCAKLQLLDLGSNSFTGEIPKEVGLIPSLEISLNLSCNQFSGEIPSQFSSLSKLGVLDLSHNKLSGNLDALSDLQNLVSLNVSFNSFSGELPNTPFFHKLPLSDLAENQGLYIAGGVVTPAEAKGHARSAMKFIMSILLSTSAILVLLTIYVLVRAHITNKVLMENENWEMVLYQKFEFSVDDVVMNLTSANVIGTGSSGVVYKPITEKSDVYSFGMVLLEVLTGRHPLDPTLPGGAHLVQWVRNHLASKGDPSDILDTKLRGRADPTMHEMLQTLAVSFLCVSTRADDRPAMKDVVAMLKEIRPVETSRGDHDVLKGGLTSHNSPPPPKNVVSHGSSTCSYNFSDDSIS* 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 36 145 IPR032675 -
Rops11g02532 927 FunFam Leucine-rich receptor-like protein kinase family protein 34 191 - -
Rops11g02532 927 PRINTS Leucine-rich repeat signature 534 547 - -
Rops11g02532 927 PRINTS Leucine-rich repeat signature 628 641 - -
Rops11g02532 927 PANTHER UNNAMED PRODUCT 299 807 - -
Rops11g02532 927 SUPERFAMILY RNI-like 286 656 - -
Rops11g02532 927 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Rops11g02532 927 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Rops11g02532 927 Pfam Leucine rich repeat 609 663 IPR001611 GO:0005515
Rops11g02532 927 Pfam Leucine rich repeat 533 591 IPR001611 GO:0005515
Rops11g02532 927 FunFam Putative LRR receptor-like serine/threonine-protein kinase 609 694 - -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 531 608 IPR032675 -
Rops11g02532 927 MobiDBLite consensus disorder prediction 901 915 - -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 146 226 IPR032675 -
Rops11g02532 927 Gene3D Transferase(Phosphotransferase) domain 1 769 894 - -
Rops11g02532 927 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Rops11g02532 927 FunFam Predicted protein 192 288 - -
Rops11g02532 927 FunFam Leucine-rich receptor-like protein kinase family protein 336 608 - -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 609 692 IPR032675 -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 432 530 IPR032675 -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 334 431 IPR032675 -
Rops11g02532 927 Gene3D Ribonuclease Inhibitor 227 333 IPR032675 -
Rops11g02532 927 MobiDBLite consensus disorder prediction 885 915 - -
Rops11g02532 927 SUPERFAMILY Protein kinase-like (PK-like) 781 883 IPR011009 -
Rops11g02532 927 SMART LRR_typ_2 628 651 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 437 461 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 293 317 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 148 172 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 555 579 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 485 509 IPR003591 -
Rops11g02532 927 SMART LRR_typ_2 341 365 IPR003591 -
Rops11g02532 927 SUPERFAMILY L domain-like 33 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02532 Rops-Chr11 43188014 43191693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02532 783 926 Receptor kinase-like Gene Family AT5G56040 67.568 2.36e-57 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Rops11g02532 LRR_8 1.9e-06 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02532 - - gmx:100802880 1333.93