Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02526 ATGGCGGAAATTGCAGTGAACCTTGTGATTGACAAGTTGATCCCTTTACTAATAGATGAAGTTAATCTCTTGAGAAATGTGAAAGGCCAACTTGTGTCGGTGAAAAATCAGCTATGGATGATAAAAGCTTACCTTAAGGATGCAGACGTGCAAGCAGAAATGACAAAAACTAGTAACTTGAAGAAAGAGTGGGTCAGGCAAATGAGAGAAGTTTCTTATCAAATTGAAGATGTCATCGATGACTACTTGCTTCAAGTAGGGGAGGCTCAATCTTGGCGCCAAGCGGACAATAAGCTTCATTACAAGTGTGGGGTTGTTGGTGTTGTCCGTAAAATTTGTGACTTGCTCAAAAGTGTAAAGCCCCGTCATAAGATTTCATCACAGATTGGTGAGATTGAAAAATCATTAGAGAGACTCAGCAAAGATAAGGATATTTTCGGGTTCAATTCATCTGCTCCAGAATCAAGCAATGATGGTGGTGCAACTTCACATGTTTCCACACTGCATCACCTTCGAAGGGGTGCCCTTTTCATTGAGGATGATCAGCTTGTGGGAGTAGACCACACCAAGCAAGTACTATCCAGTTGGCTGAGAGAAAAACCAAGTACTCGCACTGTGATCTCAGTGGTAGGCGAAGGTGGACAAGGTAAAACTACTATTGTGAACAAGGTATTCAACGAGCAGAAGAAGGAAAAATCTTTTGATTGCTATGCTTGGATCACTGTGTCTCGATTGCTCAGGGGGGAACAACTATTGAAGAATTTGTTGGAGAGGTTTTATGTTGAGTCTGGCAAGAAGAAAGATGAGGTCACAGAGATTAGTAAAATGGACAATGACACTCTGGTTATTAAACTCAGAGAACACTTACAAGAAAGGAGCTATATGATTGTTTTTGATGATGTATGGGATATAAACTTTTGGGGAGATGTAGAATTTGCATTACCAAAAGACAAGGGAAGGATTATCATCACCACAAGGGATAGGAGAGTTGCTGAGTTTTGTGGCAGTTATGGACCAATTCACATCCATGACATGGAACCATTGAAGCAACATGATGCTTGGAACCTTTTCTGTCTTAAGGCATTTCGAGAAGGTTGCCCCGAAGAATTGAAAGGATTGTCCGAAGAGTTTGTTAAGAGGTGCAATGGAGTGCCACTTGCAATTGTGGCCATGGCGGGCCTCTTATCAACCAAGAATAAAAATGTCTTAGAATGGCAAAGGGTATATGATAGCCTACGCTCAAAACTTTCAAGTGATCCCCATCTTAGTAGTATCCACCAGGTTTTATCTGAAAGTTATCAAGATCTTGATTATCACCTCAAGCTATGTCTCTTGTACTTCGGCCTTTTCCCTGAGGATTACTCGATCAGTCGTGCGAGACTCATTAGGTTGTGGATAGCAGAGGGTTTTGTGGAGAACAAAGAGAATGAAGGTCAAACACTAGAGGAAGTAGCAGAGGAATACTTGGCCGAGCTTATTGCTAGGAGCTTGGTTAAAGTGGCTGATGTGAATCTCTATGGTAGAGTTAAAAGTTGTCGGGTCCATGATTTGATGCATGATTTTATTCTCAGAAAGTGTGGGGAGCTAAACTTTTGTCAAGTGAAGAAAAGTGAGGGATCTGAGTTGCATCAGTGGACTCGGCGCTTATCAATTGACACAAGCATTGGAGATGTTACTATGAAAAGAAGCACCACAAATTATGGACAAGTGCGGTCTTGTTTTCTTTTCAACATTATTCAAGGCATGCCCCATACAGTGGTCGAATCCTTGTTTTCCAGTTTCAAGCTCTTGGTAAGATTAGACTGTCAAGATACACCTCTTGACTATCTTCCTGAATCGGTTGGAAAGTTATTCCGTCTGAAGTATTTGAATTTAAAGAAAACTAAGATCAAGACCATTCCCAAGTTCATTGGCAAGTTGCAGAACCTAGAGACTCTGGACCTAAGATATACTGATGTGGAAGAATTGCCGTCAGAGGTTAACAGACTTACCAAGTTGCGTTATCTCCGAGGACATTTCACGAAATTAAAGGAAGGGATTGGGAATTTAAGGGCCCTGCAAAAGTTAGGCTGGGTTGATGTAAGTGTCAATGGGGATGGCATTCTGAGTGAACTAAAGAATCTTAAGCAGATGAGAGTCTTGAAGATTTGGGGGCTGAATAGAGAAAATGGAAAATTATTATGCAATGCTATAGAGAGCATGACCAATCTGTGTACGTTGGCAGTTCATGCAGATGAAACGGATGAAGTTGAAGTTCTTGACTTGGAATCACTCACTCATCCTCCTCAGCACCTTCAGTGCCTTATACTGTGTGGGCGTTTACAAAAATTGCCAGAATGGATTCCCAGACTTAAAATTTGA 2361 0.413 MAEIAVNLVIDKLIPLLIDEVNLLRNVKGQLVSVKNQLWMIKAYLKDADVQAEMTKTSNLKKEWVRQMREVSYQIEDVIDDYLLQVGEAQSWRQADNKLHYKCGVVGVVRKICDLLKSVKPRHKISSQIGEIEKSLERLSKDKDIFGFNSSAPESSNDGGATSHVSTLHHLRRGALFIEDDQLVGVDHTKQVLSSWLREKPSTRTVISVVGEGGQGKTTIVNKVFNEQKKEKSFDCYAWITVSRLLRGEQLLKNLLERFYVESGKKKDEVTEISKMDNDTLVIKLREHLQERSYMIVFDDVWDINFWGDVEFALPKDKGRIIITTRDRRVAEFCGSYGPIHIHDMEPLKQHDAWNLFCLKAFREGCPEELKGLSEEFVKRCNGVPLAIVAMAGLLSTKNKNVLEWQRVYDSLRSKLSSDPHLSSIHQVLSESYQDLDYHLKLCLLYFGLFPEDYSISRARLIRLWIAEGFVENKENEGQTLEEVAEEYLAELIARSLVKVADVNLYGRVKSCRVHDLMHDFILRKCGELNFCQVKKSEGSELHQWTRRLSIDTSIGDVTMKRSTTNYGQVRSCFLFNIIQGMPHTVVESLFSSFKLLVRLDCQDTPLDYLPESVGKLFRLKYLNLKKTKIKTIPKFIGKLQNLETLDLRYTDVEELPSEVNRLTKLRYLRGHFTKLKEGIGNLRALQKLGWVDVSVNGDGILSELKNLKQMRVLKIWGLNRENGKLLCNAIESMTNLCTLAVHADETDEVEVLDLESLTHPPQHLQCLILCGRLQKLPEWIPRLKI* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02526 786 Coils Coil 471 491 - -
Rops11g02526 786 Gene3D Ribonuclease Inhibitor 559 785 IPR032675 -
Rops11g02526 786 PANTHER DISEASE RESISTANCE PROTEIN RP 51 772 IPR044974 GO:0006952
Rops11g02526 786 FunFam Probable disease resistance protein At1g63360 433 524 - -
Rops11g02526 786 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 447 IPR027417 -
Rops11g02526 786 Gene3D - 439 525 IPR036388 -
Rops11g02526 786 Pfam Rx N-terminal domain 5 94 IPR041118 -
Rops11g02526 786 FunFam Probable disease resistance protein At1g61300 167 337 - -
Rops11g02526 786 CDD RX-CC_like 2 141 IPR038005 -
Rops11g02526 786 SUPERFAMILY L domain-like 513 784 - -
Rops11g02526 786 Gene3D - 4 126 - -
Rops11g02526 786 PRINTS Disease resistance protein signature 206 221 - -
Rops11g02526 786 PRINTS Disease resistance protein signature 288 302 - -
Rops11g02526 786 PRINTS Disease resistance protein signature 381 395 - -
Rops11g02526 786 PRINTS Disease resistance protein signature 638 654 - -
Rops11g02526 786 Gene3D - 164 337 IPR027417 -
Rops11g02526 786 Pfam NB-ARC domain 190 434 IPR002182 GO:0043531
Rops11g02526 786 Gene3D - 347 437 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02526 Rops-Chr11 43015247 43019717 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02526 197 388 WRKY Transcription Factor Family AT5G45050 27.273 8.09e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02526 K13457 - cave:132169539 617.461