Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02525 ATGCTTGCCCTCCCACCTCCACCCACAAGGCAAACCAACCAAGTCTCTCCTCACCAAATTGTCACATCAAAACAACCAATTAACCAACCTTCTCTGGAATCAAATGATCCAAATTCAGATACAACAAAGTTAAGAAGAGCACCAACATTAAGACAACCTAGATTCCAAAGGACTAACCCAATCATATGGTTTGCTGCAGTGCTGTGCCTCATATTCAGCCTTGTACTTATTTTCTTTGGGGTTGCAACTTTGATCATTTTCCTAGCCATCAAACCAAGAAACCCCACATTTGACATCCCCAATGCAAACCTCAATGCAGTATATTTTGATTCACCAGAATACTTCAATGGTGACTTTACTCTGCTTGCAAACTTTACTAATCCCAACAGCAAAATTGATGTGAGCTTTGAGTCTTTGGATGTTGAGCTTTTCTTCTCAGACAGAATCATATCAGCACAGTCAATCCAGCCATTTACTCAGAGGAGAAGGGAAAGTAGGTTGCAATCATTGCACTTCATATCCAGCTTGGTGTTTTTGCCAAAGGATCTTGGTGTGAAACTTCAAAAACAGATCCAAAGTAACTTGGTCAACTACAATATAAGAGGAACATTTAAAGTGAGAGTGACTTTGGGGCTCTTTCATTTATCTTACTTGCTGCATAGCAGGTGCCAAATAGAGATGACTAGTCCACCAACTGGTGTCTTGGTAGCCAGGAAATGCATCACAAAGAGATGA 735 0.4068 MLALPPPPTRQTNQVSPHQIVTSKQPINQPSLESNDPNSDTTKLRRAPTLRQPRFQRTNPIIWFAAVLCLIFSLVLIFFGVATLIIFLAIKPRNPTFDIPNANLNAVYFDSPEYFNGDFTLLANFTNPNSKIDVSFESLDVELFFSDRIISAQSIQPFTQRRRESRLQSLHFISSLVFLPKDLGVKLQKQIQSNLVNYNIRGTFKVRVTLGLFHLSYLLHSRCQIEMTSPPTGVLVARKCITKR* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02525 244 MobiDBLite consensus disorder prediction 1 50 - -
Rops11g02525 244 MobiDBLite consensus disorder prediction 7 50 - -
Rops11g02525 244 SUPERFAMILY LEA14-like 94 214 - -
Rops11g02525 244 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 235 - -
Rops11g02525 244 Pfam Late embryogenesis abundant protein 126 213 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02525 Rops-Chr11 43006155 43006889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02525 - - gmx:100803431 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02525 11 43006155 43006889 Rops9g00166 9 2148214 2149234 PCT