Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02523 ATGAAGAGTGAAGAGGATTGGAGAAGAAGAAGAAGAAGGAGACAATCTGGGAAAGCCAGGAGAATTCTTGTTGGAGGAGTTGAAACAACACCACGTCTTGCTCAATGGAGAATCGAAAACTTGTCTTCTTGCACTTACCGCAAATCCGATCCTTTCAAGATCGGAAAGTGGAATTGGTATTTGTCTGTGGAGAAGAACAGGGTTTTGTTTGTTAAATTGTTCCCAGAAACATCCAATCTAACTAGAGAAAATCCACCAATTGCTTCTTTCATCGTTCGGGTGGTTAGTTCTGTTGGAGATCGCAAGGCCCTCACACATCCAGAAATAAAGGACAAATTAATCAAGAGCAATGAGGATTTTGTTTGGGCAATTGAGGTTCCACTGACTGGGAAATTCATTATTGACGTTGAGTTCCTTGATTTGAAGACTGCATCTCCAAACGGTGGAGAACCTTACTCCATCTGGGCTGAAGGATTTACTCAGAAAAGATCAAATGCAAAAGCCTTAGATTCTCTTGGTAGAATGCTGACAGAAGGCATTCACACAGACATCACCATCAATGCTTCTGATGGAAGTATAGGAGCTCATCGAGCTGTTCTTGCTGCCCGGTCACCGGTCTTCTGCAGCATGTTCTCACATGATCTTCAGGAGAAAGAGCTTTCAACTATAAACATTTCAGACATGTCAATTGAAGCTTGTCAGGCTTTTCTCAATTATCTTTATGGGATCATCAAGAATGAAGAATTTCTGATGCATAGGCTGGCCCTTTTGCATGCAGCTGATAAGTATGACATATCTGATTTGAGAGAGGCATGCCATGAGAGTCTTCTAGAAGATATTGATACAAAGAATGTGCTTGAGAGGCTCCAAAAAGCATCTCTATATCAGTTGATGAAACTGAAGATGAGCTGTATCCGATATCTTGTGAAATTTGGTAAAATATTTGAAATTAAGGATGATTTCAATACCTTCCTGCAAAATGCAGATAGGGATCTTATTGCTGAAGTCTTCCATGAAGTTCTTGGTGCTTGGAAAGGATTCTGA 1044 0.4061 MKSEEDWRRRRRRRQSGKARRILVGGVETTPRLAQWRIENLSSCTYRKSDPFKIGKWNWYLSVEKNRVLFVKLFPETSNLTRENPPIASFIVRVVSSVGDRKALTHPEIKDKLIKSNEDFVWAIEVPLTGKFIIDVEFLDLKTASPNGGEPYSIWAEGFTQKRSNAKALDSLGRMLTEGIHTDITINASDGSIGAHRAVLAARSPVFCSMFSHDLQEKELSTINISDMSIEACQAFLNYLYGIIKNEEFLMHRLALLHAADKYDISDLREACHESLLEDIDTKNVLERLQKASLYQLMKLKMSCIRYLVKFGKIFEIKDDFNTFLQNADRDLIAEVFHEVLGAWKGF* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02523 347 Gene3D Potassium Channel Kv1.1; Chain A 159 310 IPR011333 -
Rops11g02523 347 Pfam BTB/POZ domain 175 278 IPR000210 GO:0005515
Rops11g02523 347 SUPERFAMILY POZ domain 167 278 IPR011333 -
Rops11g02523 347 PANTHER OS08G0495500 PROTEIN-RELATED 27 346 IPR044714 -
Rops11g02523 347 ProSiteProfiles BTB domain profile. 182 241 IPR000210 GO:0005515
Rops11g02523 347 SMART BTB_4 182 280 IPR000210 GO:0005515
Rops11g02523 347 CDD BTB_POZ_ZBTB_KLHL-like 181 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02523 Rops-Chr11 42979987 42982389 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Rops11g02523 BTB 1.7e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02523 K10523 - gmx:100790186 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02523 11 42979987 42982389 Rops11g02523 11 42979987 42982389 ECH
Rops11g02523 11 42979987 42982389 Rops9g01309 9 21666195 21676680 PCT