Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02516 ATGTGTTGGAGGATCCACGAGAATATGAGGCTTTTTGTTACTGGTGAAGGCGTACCAGGTCAAAGGGCACGGGAAGACAGCCCACCACCAGCTGAGAAGAAGCCAAGGGCCGGCAAGAAGCTTCCAAAGGAAGGTGGTGCTGCCACCCGTCGAAGAAGAAGGAAGGGTTGGGTTTGGACATGTCCTAGGGTTGAAATGATTGTGAGGAAACATCTTGAGGATGTCTTCCAGAAGAACGATGGCATAGCTCCTGGCATGCTTCGACTTCTTTTCCATGATTGCTTTCCTCAGGGATGCGATGCATCTGTATTGTTGAACAGTGTTGGAGACCAAAAAGATGAAAAGACACACCCTGCCAACGTAGGTATAAGACAAGAGGCACTTCAAACCATTGAAGACCTTCGAGATCTTGTCCAATTACGAGAAGAGGTTCTCTTAACATCATCTGATGTTGTCCGTGCCAACCTTACACCCGCTCTTGTTGCTGAGGCTAATTTGTTGCGCGAGAGGTTTGCACATCGATACAGTTGCACCCTCTTTGGTATGTATCCTGGAAGCCGTGGAGGTGAGAATTCTAGAAGTGGTGAAGGTATTGGTTCTGGCCTGGATGGTGCAGGGCGAAGCATAACTTCGCGCAGGTCTGGTGGAGCTAAGGTTGTTGAAGCTGATGGAGCACCTCTAGTTGACGTTGAAGCTTTGCATGCCTTGATTCGGTTATTTCGCATAGTTCAGCCACTATATAAAGGTCAATTGCAGAGGCTTCTCGTGAATCTTTGTGCACATAGTGAAACCAGGACTTCTCTGGTGAAAATTCTGATGGACTTGCTAATCCTTGATGTAAGAAAGCCTGCCAGTTATTTTAGTGCGGTTGAGCCTCCACACACACACATGCATGTTGAGAGGTGA 906 0.4779 MCWRIHENMRLFVTGEGVPGQRAREDSPPPAEKKPRAGKKLPKEGGAATRRRRRKGWVWTCPRVEMIVRKHLEDVFQKNDGIAPGMLRLLFHDCFPQGCDASVLLNSVGDQKDEKTHPANVGIRQEALQTIEDLRDLVQLREEVLLTSSDVVRANLTPALVAEANLLRERFAHRYSCTLFGMYPGSRGGENSRSGEGIGSGLDGAGRSITSRRSGGAKVVEADGAPLVDVEALHALIRLFRIVQPLYKGQLQRLLVNLCAHSETRTSLVKILMDLLILDVRKPASYFSAVEPPHTHMHVER* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02516 301 ProSitePatterns Peroxidases active site signature. 83 94 IPR019794 GO:0004601
Rops11g02516 301 Gene3D - 57 177 - -
Rops11g02516 301 Pfam Peroxidase 68 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 SUPERFAMILY Heme-dependent peroxidases 60 140 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 PRINTS Plant peroxidase signature 61 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 PRINTS Plant peroxidase signature 85 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 ProSiteProfiles Plant heme peroxidase family profile. 60 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 MobiDBLite consensus disorder prediction 26 45 - -
Rops11g02516 301 MobiDBLite consensus disorder prediction 189 215 - -
Rops11g02516 301 PANTHER - 59 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops11g02516 301 MobiDBLite consensus disorder prediction 15 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02516 Rops-Chr11 42902297 42903628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02516 55 152 Peroxidase AT1G71695 41.748 3.66e-20 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02516 K10592 - gmx:100802630 252.292