Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02512 ATGGCGGAAATTGCAGTGAACCTTGTGATTGACAAGTTGATCCCTTTACTAATAGATGAAGTTAATCTCTTGAGAAATGTAAAAAGCCAACTTGTGTCAGTGAAAAAACAGCTATTGATGATACGGGCTTACCTGAAGGAAGCAGACGGGAAAGCAGAAATGAAAAAAACCAGTGACCAGGTGAAAGAGTGGATCACACAAATGAGAGAAGTTTCTTATCAAATTGAAGATGCCATCGATGAATACTTGCTCCAAGTAGGGGAGGCCCAATCTTGGCGTCAAGTGAACAATAAGCTTCTTGACAAGTGTGGGGTTGTTGGTGTTGTACGTAAAATTTGTGAGTTGCTCAAAAGTGTAAAGCCCCGCCATAAGATTTCATCAGAGATTGGTGAGATTGAAAAATCATTAGAGAGACTCAGCAAAGATAAGGATATTTTCGGGTTCAATCCATCTGCTCCAAAATCAAGTAGTGATGGTGGTGCAACTGCACATATTTCCACATTGCATCCCCTTCGAATGGGTGCCCTTTACATTGAGGATGATCAGCTTGTGGGAGTAGACCACGTCAAGCAAAAACTATCCAGTTGGCTGAGAGAAGAACCAAGTACTCGCACTGTGATCTCAGTGGTAGGCGAAGGCGGACAAGGTAAAACTACTATTGTGAACAAGGTATTCAACGAGCAGGAAAAGGAAAAATCTTTTGATTGCTGTGCTTGGATCACTGTGTCTCAATCGCTCAGGGTGGAACAACTATTGAAGAATTTTTTGGAGAGGTTTTATGAGCAGTCCAACAAGAAAAATGAGGTCATAGAAATTAGTAAAATGGACAGGAACACTCTGGTAAATAAACTAAGAGAACACTTGCAAGAAAGGAACTATATGATTGTTTTTGATGATGTATGGGATATAAACTTTTGGGGAGTTGTAGAACATGCATTACCAAAAGACAAGGGGAGGATAATCATTACTACAAGGAATAGGGAAGTTGCTAAGTATTGTAGCAGATATGGACTAATTCACATCCATGACATGGAACCACTGAATCCAAATGATGCTTGGAACCTTTTCTGTCTTAAGGCATTTCGAGAAGGTTTCTCCGAAGATTTGAAAGAATTGTCCGAAGAGTTTGTTAAGAAGTGCAATGGAGTGCCACTAGCAATTGTGGCTTTGGCTGCCCTCCTATCAACCAAGCATAGTGTCTCAGAATGGCAAATGGTATTTGATGGCCTACGCTCTAAACTTTCAAGTGATCCCGATCTTAGTATTATACACCAGGTTTTATCAGAAAGTTACCAAGATCTTGATTACCACCTTAAGTCATGCCTCTTGTACTTCGGCCTTTTCCCTGAGGATTACTCGATCAGTCGTGGCAGACTCATTAGGTTGTGGATAGCAGAGGGTTTTGTAGAGAACAAAGAGAATGAAGGTCAAACACTAGAGGTAGTAGCAGAGGAATACTTGGACAAGCTTATTGCTAGGAGCTTGGTTAAAGTGGCTGATGTGAATCTCTATGGTAGAGTTAAAAGAAGTTATCGGGTCCATGATTTGATGCATGATTTTATTCTCAGAAAGTGTGGGGAGCTAAACTTTTGTCAAGTGAAGAAAAGTGAGGGATCTGAGTTGCATGAGTGGACTCGGCGCTTATCAATTGACACAAGCATTGGTGATGTTACTATGAAAAGAAGCACCACAAATTATGGACAAGTGCGGTCTTGTTTTCTTTTCAACATTATTCAAGGCATGCCCCATCCAGTGGTCGAATCCTTGTTTTCCAGTTTCAAGCTCTTGGTAAGATTAGACTGTCAAGATACACCTCTTGATTATCTTCCTGAATCGGTTGGAAAGTTATTCCATCTGAAGTATTTGAATTTAAGGATAACTAAGATCAAGACCATTCCTAAGTTCATTGGCAAGTTGCAGAACCTAGAGACTCTGAACCTAAAATATACTGATGTGGAAGAATTGCCGTTAGAGGTTAACAGACTTACCAAGTTGCGTTATCTTGTAGCACGTCGCATAAAAATAAAGGAAGGGGTTGGGAATTTAAATTCGCTGCAAAAGTTAGGCTGGGTTGATGTAAGTGTCAATGGGGATGGCATTCTGAGTGAACTAAAGAATCTTAAGCAGATGAGAGTCTTGTACATTGTGGGGCTGAATAGAGAAAATGGAAAATTATTATGCAATGCTATAGAGAGCATGACCAATCTGTGTACGTTGACAGTTGCTGCAGTTGAAACGGATGAAGTTGAAGTTCAACTTGACTTGGAATCACTCACTCATCCTCCTCAGCACCTTCAGCGCCTTAGACTATATGGGCGTTTACAAAAATTGCCAGGATGGATTCCCAGACTTAAAAATTTGATCTTTTTGTCCCTACGTAATTCAGGATTAAGGGAAGATCCATTACCTCTTCTTAAAGACTTGTCAGCATTGTTGGAGCTCTATCTTTGGGACTCATCATATGAAGGTGAAGAGCTGTATTTTCGAGAGGGATGGTTTATGAAACTGAAGGTATTGCTAATCGACTTGCCCTCTTTGGAGACAATAAAGATAGATGGAGGAGCAATGCCTCACCTCCAAATGTTCACATTATATCAATGGCACCCTATATCGGTGGAGGTGCCAGCTCATATTCAGAAAGTGATGACAATAAATGACTAA 2661 0.4051 MAEIAVNLVIDKLIPLLIDEVNLLRNVKSQLVSVKKQLLMIRAYLKEADGKAEMKKTSDQVKEWITQMREVSYQIEDAIDEYLLQVGEAQSWRQVNNKLLDKCGVVGVVRKICELLKSVKPRHKISSEIGEIEKSLERLSKDKDIFGFNPSAPKSSSDGGATAHISTLHPLRMGALYIEDDQLVGVDHVKQKLSSWLREEPSTRTVISVVGEGGQGKTTIVNKVFNEQEKEKSFDCCAWITVSQSLRVEQLLKNFLERFYEQSNKKNEVIEISKMDRNTLVNKLREHLQERNYMIVFDDVWDINFWGVVEHALPKDKGRIIITTRNREVAKYCSRYGLIHIHDMEPLNPNDAWNLFCLKAFREGFSEDLKELSEEFVKKCNGVPLAIVALAALLSTKHSVSEWQMVFDGLRSKLSSDPDLSIIHQVLSESYQDLDYHLKSCLLYFGLFPEDYSISRGRLIRLWIAEGFVENKENEGQTLEVVAEEYLDKLIARSLVKVADVNLYGRVKRSYRVHDLMHDFILRKCGELNFCQVKKSEGSELHEWTRRLSIDTSIGDVTMKRSTTNYGQVRSCFLFNIIQGMPHPVVESLFSSFKLLVRLDCQDTPLDYLPESVGKLFHLKYLNLRITKIKTIPKFIGKLQNLETLNLKYTDVEELPLEVNRLTKLRYLVARRIKIKEGVGNLNSLQKLGWVDVSVNGDGILSELKNLKQMRVLYIVGLNRENGKLLCNAIESMTNLCTLTVAAVETDEVEVQLDLESLTHPPQHLQRLRLYGRLQKLPGWIPRLKNLIFLSLRNSGLREDPLPLLKDLSALLELYLWDSSYEGEELYFREGWFMKLKVLLIDLPSLETIKIDGGAMPHLQMFTLYQWHPISVEVPAHIQKVMTIND* 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02512 886 Gene3D - 347 435 IPR042197 -
Rops11g02512 886 Pfam NB-ARC domain 189 432 IPR002182 GO:0043531
Rops11g02512 886 Gene3D - 4 126 - -
Rops11g02512 886 SUPERFAMILY L domain-like 512 868 - -
Rops11g02512 886 FunFam Probable disease resistance protein At1g63360 431 523 - -
Rops11g02512 886 CDD RX-CC_like 2 141 IPR038005 -
Rops11g02512 886 Gene3D - 169 337 IPR027417 -
Rops11g02512 886 Coils Coil 469 489 - -
Rops11g02512 886 PANTHER DISEASE RESISTANCE PROTEIN RP 34 846 IPR044974 GO:0006952
Rops11g02512 886 PRINTS Disease resistance protein signature 287 301 - -
Rops11g02512 886 PRINTS Disease resistance protein signature 637 653 - -
Rops11g02512 886 PRINTS Disease resistance protein signature 206 221 - -
Rops11g02512 886 PRINTS Disease resistance protein signature 380 394 - -
Rops11g02512 886 Gene3D Ribonuclease Inhibitor 561 884 IPR032675 -
Rops11g02512 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 445 IPR027417 -
Rops11g02512 886 Gene3D - 437 524 IPR036388 -
Rops11g02512 886 FunFam Probable disease resistance protein At1g61300 170 335 - -
Rops11g02512 886 Pfam Rx N-terminal domain 5 92 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02512 Rops-Chr11 42817027 42825133 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02512 197 655 WRKY Transcription Factor Family AT5G45050 22.379 5.54e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02512 K13457 - cave:132169539 667.537