Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02450 ATGAAGTGGGAAATGGAAATCCTCCCTCCTTCACCATATATTCACAACTCCAACAACAACACCAATTGGCTCATGGAAGGTAATAGGAACAACACCAAATGGACACCTGCTGAGAACAAGTTGTTTGAAAATGCTCTTGCAGTGTATGATAAGGACACCCCAGATCGGTGGCACAAAGTTGCTGAAATGATACCAGGGAAAACTGTTGGTGATGTGATGAAGCAGTATAAGGAATTAGAAGTAGATGTTAGTAACATAGAAGCTGGGTTGATCCCAATTCCTGGTTACAGTACCACCTCACCTTTCACCTTAGAGTGGGTTAACACTCCTGGGTATGATGGTTTTAAAGGACTCACTGCAAAGAGATCCTCCTCAGGTAGACCTCCTGATCAGGAAAGGAAGAAAGGTGTGCCATGGACTGAAGAGGAACACAAGTTGTTTCTACTGGGTCTGAAAAAGTATGGCAAAGGTGATTGGAGAAATATATCACGTAATTTTGTGATTTCTAGAACCCCAACTCAGGTTGCTAGCCATGCTCAAAAGTACTTCATAAGGCAACTTTCAGGAGGCAAGGACAAGAGAAGAGCTAGTATCCATGACATAACTACAGTTAATCTCACAGAAACCACAAGAACTTCTCCTTCAGAAGACACCAAGAGTACCACTTCACCACAACATTCCATGATGCTCTCAAGGCAGCATCCAAATTCCACTGCTACCACATCTGGAGTTCATTTTCAATGGAATAATCAGCCAAATGCAGGAGTAGCTATGGCACTGAATTCTCCACATGAACAAGTATTCATGTCTCCTTATGGACTCAACTCCTATGGTTATAAAATGCAGGGCCAAAATCTGCATAGAAGTCCTCTTCATGGGTCTTCTTACTTAGGACCTCAGACTCAAAACATGGTTTTCCAAATGCAATCCCCTCAATACTATTCCCATGCATGA 954 0.4245 MKWEMEILPPSPYIHNSNNNTNWLMEGNRNNTKWTPAENKLFENALAVYDKDTPDRWHKVAEMIPGKTVGDVMKQYKELEVDVSNIEAGLIPIPGYSTTSPFTLEWVNTPGYDGFKGLTAKRSSSGRPPDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVISRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTRTSPSEDTKSTTSPQHSMMLSRQHPNSTATTSGVHFQWNNQPNAGVAMALNSPHEQVFMSPYGLNSYGYKMQGQNLHRSPLHGSSYLGPQTQNMVFQMQSPQYYSHA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02450 317 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 28 256 IPR043363 -
Rops11g02450 317 MobiDBLite consensus disorder prediction 207 241 - -
Rops11g02450 317 ProSiteProfiles Myb-like domain profile. 26 80 IPR001005 -
Rops11g02450 317 ProSiteProfiles SANT domain profile. 139 187 IPR017884 -
Rops11g02450 317 Gene3D - 27 93 - -
Rops11g02450 317 ProSiteProfiles SANT domain profile. 31 84 IPR017884 -
Rops11g02450 317 CDD SANT 138 183 IPR001005 -
Rops11g02450 317 NCBIfam myb-like DNA-binding domain, SHAQKYF class 134 186 IPR006447 GO:0003677
Rops11g02450 317 CDD SANT 33 79 IPR001005 -
Rops11g02450 317 SUPERFAMILY Homeodomain-like 28 79 IPR009057 -
Rops11g02450 317 Gene3D - 137 187 - -
Rops11g02450 317 SMART sant 30 82 IPR001005 -
Rops11g02450 317 SMART sant 135 185 IPR001005 -
Rops11g02450 317 SUPERFAMILY Homeodomain-like 133 186 IPR009057 -
Rops11g02450 317 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 187 IPR017930 -
Rops11g02450 317 MobiDBLite consensus disorder prediction 119 138 - -
Rops11g02450 317 FunFam Transcription factor SRM1 26 93 - -
Rops11g02450 317 ProSiteProfiles Myb-like domain profile. 131 183 IPR001005 -
Rops11g02450 317 FunFam transcription factor MYB1R1 137 188 - -
Rops11g02450 317 Pfam Myb-like DNA-binding domain 33 77 IPR001005 -
Rops11g02450 317 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02450 Rops-Chr11 41799936 41802446 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Rops11g02450 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02450 - - gmx:100784163 520.005