Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02445 ATGGTGTTTCAAATGGAAGATACACTCCCTCTTGTGTTTACCATAGTATCTGCTCTGTTTGCTTATCTCCTTTGGTTCCACCTCCTCGCTCGAACCCTAACCGGTCCAAAAGTTTGGCCATTCGTTGGAAGCCTTCCGGTTCTTTTCAAGAATCGGAACCGGTTTCACGACTGGATCACCTCAAACCTGGCCGGAACCGGCGGTTCAGCAACCTACCAAACATGCATCGCACCCTTCCCTTTCTTGGCTCGCAAGCAAGGGTTCTACACAGTCACAAGCCACCCTAGAAACATCGAACACATCCTCCGAACCCGGTTTGATAACTACCCTAAAGGACCTAAATGGCAAACCTCATTTCACGACCTATTGGGCCATGGAATATTCAATAGCGACGGTGAAACATGGCTCGTGCAACGTAAAACCGCAGCACTAGAGTTCACCACACGAACCCTAAGACAAGCCATGGCTCGATGGGTGAACCGGACCATAAAGAACCGGTTATGGTGCATTTTGGATAAAGCTTCAAAGGAAAAGGTTTCAGTGGATTTGCAAGACCTTTTGCTACGGTTAACTTTTGATAACATTTGTGGACTCACTTTCGGTAAGGATCCAGAAACTCTCTCACCGGATCTACCCAAAAACCCGTTTTCTCTTTCATTTGACACTGCAACTGAAGCCACCATGCATAGGTTTTTATACCCTGGATTCTTCTGGAGGATTCAGAAGCTTTTATGTTTAGGTAAAGAGAGAGAGTTAAAACAGAGTTTGAAGGTTGTTGAGGCTTACATAAACGACGCTGTTTCGGCTCGTGAGCAATCTCCTTCTGATGACTTGCTTTCACGGTTCTTAAAGAAACGAGAAGTTGCCGGAAAACGAAACCTCCGGAGTGTGGCGTTGAACTTCGTCCTAGCCGGAAGGGACACGTCATCGGTGGCGTTAACCTGGTTCTTCTGGCTCGTCATGAACCATCCTGCTGTTGAGGAGAGGATTCTCGCAGAGTTGACGGCGGTGCTGACGGAAACTCGCGGCGGAGATCAGCTGAGGTGGACGGAGGATGCGGTGGATTTCGACGAGGCTGAAAAACTGGTTTATCTGAAAGCGGCGTTGGCTGAATCGCTGCGTTTATACCCCTCGGTGCCGGAGGATTTCAAGTACGCTATCTCCGACGATGTTTTACCGGACGGTACGGTGGTTCCGGCTGGTTCCACGGTGACGTATTCGATATATTCGGTTGGGAGAATGAAGAGTGTATGGGGTGAGGATTGCATGGAATTTAAACCAGACCGGTGGTTAACGGTTCATGAAAACCGGTTCCGGTTCGAACCGCCAAAGGATCCTTATAAGTTCGTGGCTTTCAATGGTGGACCGAGAACTTGTTTGGGCAAGGACTTGGCTTACCTGCAAATGAAGTCAGTGGCCGCGGCTGTGCTTCTTCGTTACCGGCTATCTCCGGTTCCCGGTCACCGGGTTCAGCAAAAGATGTCTCTCACACTCTTCATGAAGCATGGACTCCACGTATTCTTGCATCCACGTCAGCTTGAGGTTGCCACGTCTGCATAG 1560 0.4923 MVFQMEDTLPLVFTIVSALFAYLLWFHLLARTLTGPKVWPFVGSLPVLFKNRNRFHDWITSNLAGTGGSATYQTCIAPFPFLARKQGFYTVTSHPRNIEHILRTRFDNYPKGPKWQTSFHDLLGHGIFNSDGETWLVQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKASKEKVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLPKNPFSLSFDTATEATMHRFLYPGFFWRIQKLLCLGKERELKQSLKVVEAYINDAVSAREQSPSDDLLSRFLKKREVAGKRNLRSVALNFVLAGRDTSSVALTWFFWLVMNHPAVEERILAELTAVLTETRGGDQLRWTEDAVDFDEAEKLVYLKAALAESLRLYPSVPEDFKYAISDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPDRWLTVHENRFRFEPPKDPYKFVAFNGGPRTCLGKDLAYLQMKSVAAAVLLRYRLSPVPGHRVQQKMSLTLFMKHGLHVFLHPRQLEVATSA* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02445 519 FunFam Cytochrome P450 27 514 - -
Rops11g02445 519 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PANTHER CYTOCHROME P450 26 506 - -
Rops11g02445 519 SUPERFAMILY Cytochrome P450 27 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops11g02445 519 CDD CYP86A 73 504 - -
Rops11g02445 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Rops11g02445 519 Pfam Cytochrome P450 88 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02445 Rops-Chr11 41698854 41700633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02445 16 511 Cytochrome P450 AT5G58860 73.000 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02445 K15401 - gmx:100788343 851.662