Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02438 ATGCCATCAATCATCTCCAAGCGCAAGTTGAGATCTCACGCGCCGCCACCACTCCCGGCGGCCACTTCGCCTCCCACCCGCAAATCCCCTCGCCGATGCACCGCCGCATCCCCCAATTCCTCCGTAACGGAAACTGGCGTCAATGAAATCGAAGCTGAATCACATAAAATCGCATCTATAAAACCTCGATGGAATCCTAAAGATGGTGAGCAATCGAGGATGGTGAAGGAGGCATTGCACTTGTCCACTGCACCATCTACAATGGTGTGCCGTGAGGAGGAGCAGAATCTGGTTTTAGGGTTTTGCAAGGGTTGCATTGAGCATGAGAAAGCTGGGAGTCTCTACATATGTGGGTGCCCCGGAACTGGGAAATCGTTGTCTATGGAGAAAGTGAAAGGGCTTTTGCTCAATTGGGCCACTGAGGAAGGTTTCCCTCTGCCAGATGTTTTATCTGTAAATTGTACATCCCTTGCCAATACATCTGATATTTTCACTAAGATACTTGGGTTAGACCAAGCACGTGGAAAAAAGGTTTCAGGCACACCCTTACAGCAACTTCAGAACATGTATTCTCAGAGATCGTCTATCAAGAACATGACGTTGATAATAGCTGATGAGTTGGATTATCTAATAACCAAAGACAGAGCTGTGCTCCACGATCTTTTCATGCTTACCACCTTCCCATTTTCCAGATGTATATTAATAGGTGTAGCAAATGCAATTGATCTAGCTGATCGATTTCTTCCAAGGCTTACATCATTAAGTTGCAAGCCTATTGTTGTAACTTTTCGGGCATACTCCAAAGATCAGATACTTAGGATTCTTGAAGAAAGGCTAAATGAACTTCCTTACACTGTCTTCCAACATCAAGCGCTGGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGAAATGCTCTTTGCATATGCAGGAGTGCAATAGAGATGCTAGAAGTGGAAATTAGAGAATCTGCCTGCAATTTGAATACTTCATTGGAAGAGAAATCATCCTCTGAACAAAATCTTGCTACAGCTCCTAATTTTACCAAAAAACAAGAATTTGATATTGTAAGGATTGATCATATGGCTCTTGCCTTGTCAAAGACATATAGATCACCGGTGGTGGATACAATACAATCTCTGCCACATCATCAACAGATTATACTCTGCTCTTCTATGAAACATTTCCGTGGAGCCAAGAAAGATGCAATCCTTGGGGAGTTGTATAAATCTTATACGGAGATATGCAAATCCTCACTAATTCCCCCGGCAGGAATCTTAGAATTTTCAAACATGTGCAGAGTGCTGAATGACCAGGGGCTAATTAAACTAGGACAATCTCGAGAGGATAAATTGAGAAGAGTTACGCCTAAAGTAGATGAGGGCGATATTACTTTTGCATTGCAGGGAATTCGCTTTTTCCGAAACTGTCTTCAATGA 1449 0.432 MPSIISKRKLRSHAPPPLPAATSPPTRKSPRRCTAASPNSSVTETGVNEIEAESHKIASIKPRWNPKDGEQSRMVKEALHLSTAPSTMVCREEEQNLVLGFCKGCIEHEKAGSLYICGCPGTGKSLSMEKVKGLLLNWATEEGFPLPDVLSVNCTSLANTSDIFTKILGLDQARGKKVSGTPLQQLQNMYSQRSSIKNMTLIIADELDYLITKDRAVLHDLFMLTTFPFSRCILIGVANAIDLADRFLPRLTSLSCKPIVVTFRAYSKDQILRILEERLNELPYTVFQHQALELCARKVAAASGDMRNALCICRSAIEMLEVEIRESACNLNTSLEEKSSSEQNLATAPNFTKKQEFDIVRIDHMALALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDAILGELYKSYTEICKSSLIPPAGILEFSNMCRVLNDQGLIKLGQSREDKLRRVTPKVDEGDITFALQGIRFFRNCLQ* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02438 482 Gene3D - 381 467 IPR036388 -
Rops11g02438 482 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 32 480 - -
Rops11g02438 482 CDD AAA 94 252 - -
Rops11g02438 482 PIRSF Cdc6 4 482 IPR016314 GO:0006270|GO:0051301
Rops11g02438 482 FunFam Cell division control protein 255 381 - -
Rops11g02438 482 Pfam AAA lid domain 288 321 IPR041083 -
Rops11g02438 482 SMART Cdc6_C_2 392 471 IPR015163 -
Rops11g02438 482 CDD Cdc6_C 385 467 IPR015163 -
Rops11g02438 482 Pfam AAA domain 109 226 IPR003593 GO:0016887
Rops11g02438 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 326 IPR027417 -
Rops11g02438 482 FunFam Cell division control protein 69 254 - -
Rops11g02438 482 Gene3D - 257 380 - -
Rops11g02438 482 FunFam Cell division control protein 384 474 - -
Rops11g02438 482 Gene3D - 70 256 IPR027417 -
Rops11g02438 482 MobiDBLite consensus disorder prediction 1 45 - -
Rops11g02438 482 MobiDBLite consensus disorder prediction 27 45 - -
Rops11g02438 482 SUPERFAMILY "Winged helix" DNA-binding domain 377 480 IPR036390 -
Rops11g02438 482 Pfam CDC6, C terminal winged helix domain 392 470 IPR015163 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02438 17 481 Core DNA Replication Machinery Family AT2G29680 60.254 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02438 K02213 - gmx:100787371 784.252