Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02434 ATGTTCGAGCATAAGTTCTTGCTCAACAGCAAGCACCAAGGCTACATCAATCGCATGAGTTGGAAGGGCAACCTGTTGAAAGGGACACGATTTCAACACTTGCAACAGTTCCTTCAGAATTACGAGAAGAGGATAGTTTCTTTGCTAGTTTCCTTTTGGGGTGGGGAAGAAGACCTGCAACTCTACGTGTGCTTGGTCAGCGGTTTGAGCAAGGGCTTTAATGAAGCTGTCATGGGGGTTGCAGAAGATGGTTGGCCCATGTTAGAGAGTGATGGCATTGGTGATATCACCCTTCTCGTGAATTCATCACCTAGTAAGACGATGGGAGTAAATATTGGCTATAAATTTCCATCTGTGAGCAGTCCTATATTATGTGCCAAAGCATCCACATCGTTACAGAATATCCCTCCAGCTATTATTCATAGATTCTTACGGGGGCACCGATCAGAATGGGCAGATAGCAGTATTGATGTTTACTCGGTTGCTGCCATTAAAGTTGGTCCCTGTAGCTTGCCTGGGGCTCGAGCAGGAGGTTTAGGAGGTCAGGTTATTCTTCCACTGGCTCACGTAATTGAGCATGAAGAGTTCATGAAGGTTATTAAGCTTGAAAACATGGGCTACTATAGGGACGACGTGTCTATACCTCGTGATATTTTCCTCTTGCAACTCTGTAGTGGAGTGGATGAGCATGTAGTTTGTCACAAGTGCCTCCTTTTAGCCACTATCTAG 729 0.4527 MFEHKFLLNSKHQGYINRMSWKGNLLKGTRFQHLQQFLQNYEKRIVSLLVSFWGGEEDLQLYVCLVSGLSKGFNEAVMGVAEDGWPMLESDGIGDITLLVNSSPSKTMGVNIGYKFPSVSSPILCAKASTSLQNIPPAIIHRFLRGHRSEWADSSIDVYSVAAIKVGPCSLPGARAGGLGGQVILPLAHVIEHEEFMKVIKLENMGYYRDDVSIPRDIFLLQLCSGVDEHVVCHKCLLLATI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02434 242 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 65 232 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02434 Rops-Chr11 41451189 41452327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02434 36 232 Homeobox Transcription Factor Family AT4G32880 57.000 3.59e-70 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02434 K09338 - gmx:100815727 274.633