Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02432 ATGGAGGTTTCATGGGAACAAAGTGTTACATATTCTATTAATACAATCTACCTTCTTTTCTCTGCCTACCTCGTCTTTGTAATGCAGATTGGCTTTGCCATGATATGTGCAGGATCTGTGCGTGCCAAAAATACCATGAACATAATGCTCACCAACGTGGTGGATGCAGTGGTTGGTAGCATCTCCTTCTACCTTTTTGGTTTTGCATTTGCATATGGTAATTCCAACCCTTTCATAGGTACAGATATGTTTGCTCTAGCTAACATTCCAAATGGAACTTATGACTACAGTTTCTTCCTTTACCAATGGGCTTTTGCTATAGCTGTAGGAGGCATCACAAGTGGGTCCATAGCTGAACGAACCCAATTCAGTGCCTATCTTGTTTTTTCATTTTTCCTTACTGGGTTTGTGTACCCAGTTGTGGTCCATTGGGTGTGGTCATCAAGTGGGTGGCTTAATCCCGGTTCAAGTGACTTGTTCTTGGGCTCAGGTGCCATTGATTTTGCTGGGAGTGGAGTGGTGCATTTGGTTGGTGCAATTGCTGGGCTCTGGGGATCAATCATAGAAGGCCCACGGGTCGGCCGGTTTGATGCTTATGGCAAGCCCATACCTCTCCGAGGCCACAGTGCTACCCTTGTTGTGCTTGGAACATTCTTGTTGTGGTTCGGTTGGTTCGGGTTTAATCCTGGTTCATTTGACCGGATTGTTGTGGCCTATCCTAGCACATCGGATGAAGGTAATTGGACTTCGGTGGGTCGGACTGCCTTGACAACCGCCTTAGCCGGCTCGACCGCCGGGATTGTCACCTTGTTCGGCCGCCGGTTACTAATCGGCCATTGGGATGCAATGGATGTATGCAATGGCTTGCTTGGTGGGTTTGTTGCCATCACCTCTGGGTGCTCAGTTGTGGAGCCATGGGCTGCCATGCTTTGCGGGTTTATCTCGGCTTGGGTCTTGATTGGGCTCAACATTGTGGCCCTAAAAATGAACTATGATGACCCGTTAGAGGCAGCCCAATTGCATGGTGGGTGTGGCATTTGGGGTTTGTTGTTTACAGGGTTGTTTGCCAAAGAGGAGTTTGTGATTCAAGTCTATAATTCAGGGGTGGCAGTGAAACGGCCCTATGGACTTTTACTTGGAGGTGGATGGGGTTTGATTGTAGCTCAAGTGGTTGAGATTTTGGTAATCTTTGGATGGGTTAGTGTAACAATGGGCCCTATGTTCTATGCCTTGCACAAGCTTAAGATACTGAGAATTCCTATGGATGATGAACTTGCTGGCCTTGATATCTCAATCCATGGAGGCTATGCTTATGTTCCTCAAGACCATAATCATCCTCGATCTTATGATGATTATATTCATACCCAAGATGACTAA 1377 0.4662 MEVSWEQSVTYSINTIYLLFSAYLVFVMQIGFAMICAGSVRAKNTMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTDMFALANIPNGTYDYSFFLYQWAFAIAVGGITSGSIAERTQFSAYLVFSFFLTGFVYPVVVHWVWSSSGWLNPGSSDLFLGSGAIDFAGSGVVHLVGAIAGLWGSIIEGPRVGRFDAYGKPIPLRGHSATLVVLGTFLLWFGWFGFNPGSFDRIVVAYPSTSDEGNWTSVGRTALTTALAGSTAGIVTLFGRRLLIGHWDAMDVCNGLLGGFVAITSGCSVVEPWAAMLCGFISAWVLIGLNIVALKMNYDDPLEAAQLHGGCGIWGLLFTGLFAKEEFVIQVYNSGVAVKRPYGLLLGGGWGLIVAQVVEILVIFGWVSVTMGPMFYALHKLKILRIPMDDELAGLDISIHGGYAYVPQDHNHPRSYDDYIHTQDD* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02432 458 Pfam Ammonium Transporter Family 18 438 IPR024041 GO:0008519|GO:0016020|GO:0072488
Rops11g02432 458 NCBIfam ammonium transporter 14 438 IPR001905 GO:0008519|GO:0016020|GO:0072488
Rops11g02432 458 SUPERFAMILY Ammonium transporter 11 419 - -
Rops11g02432 458 PANTHER AMMONIUM TRANSPORTER 10 434 - -
Rops11g02432 458 FunFam Ammonium transporter 1 452 - -
Rops11g02432 458 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Rops11g02432 458 Gene3D Ammonium transporter AmtB like domains 3 453 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02432 Rops-Chr11 41226013 41227573 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02432 7 444 Inorganic Solute Cotransporters AT1G64780 65.393 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02432 K03320 - pvy:116129597 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02432 11 41226013 41227573 Rops11g02432 11 41226013 41227573 ECH