Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02420 ATGACACCAACAACGTCACCTTTCAGTCTCGCTTTTTCCTTCGCCGCCATTTTTACCATAACTGCCGTCAACGGCTTTGGCACCGCCGCCACCACCGCCGTCATCTACGGCACCGGCACCGTCTGTGGCATAGTTTCCGATGAGCCCCACCAGCTCATCAAATGCTACCAAAACGGAAAACATTTCCCTGTGATCATTCCCAACGTTTCATTCCGAGCCATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCCGGTCCGGTGGCTACACCCTCCATTGTTGGGACACAAGTGCACCAACGTTGGTGTTTCGACCCAAAAGGTTGTTTCACAGTGAAGTGGTGCAGTTGAGTGATGTAGCAGTTGGTGATGCTCAAGTTTGTGCTAGAGAGTTGAACTCTGGTGTTGTAAGGTGTTGGAGAGGTGGTGGTGGAAAAGGGTTTGAATTTCCTTCACCTGGGGAGGGTTTAAGGTTTAGAAGCATCACTTCTGGGTGTGGTTTTTCTTGTGGGATCTTGAAGGAGAACAACAAGGTTTGGTGTTGGGGTGAGGGTGGTAATGGTGTTGAGATTCAAAGACAGTTTGGGAATTTGTCTATGTCAACATTGGTTGCTGGGGTGTCACATGTTTGTGGTTTAACTCTTAATGGGGTTTTAGTTTGTAGAGGAAACAATGGTTCTGGTCAGTTAGGTGTTCCTTTCAGTTCAGTTTCAGTTTTTTCAACTCTTGCTTTGGGAGCAGATTTTACTTGTGCTATTAGGCAAAGAAATGGACTTGTTGTGTGTTGGGGTGGTGGTGCTAGAAAGTTTGAGTTTGATAGTAATGTGATTCAAGGTGTTTCTTTTGAATCAATTGTTGCTGGTTTGGATTTTGTTTGTGGATTGACAACTAGGAATTTTTCTGTGATTTGTTGGGGTCCTGGTTGGTCTTCTAAGCTTCATCTGCCTTGTGATATTCCTTTCGGAATGGTTCTTCCAGGTCCATGTGTTAAGGATGCTTCTTGTAGTTCTTGTGGTATGTATCCAAATTCTGATGTGCTCTGTCATGGTTCTGGAAGTATTTGCTATTCATGTCAAACTGAGGTTCCATTAGCTGTGCCTTTAGTTCCCAAGCAACAACAGTCTTCTTCAGCTGAAGATAAAGACTCGAAGGAATTGTTGGCATTTCTGATTGTTGGATCAGTTGGGGCTTTTGCAGGTCTATGCACTATTCTTTATTTCCTTTGGATTGGAGCTAGAAGATTCTTTAAGAAAAGAGTTGATCATTCTGTGCAACCCACAAGTGATGAGTCTGATGCCTATGTAGATATAATTCCAATGCCTAACCTTGGTTCTAATGGAACAACATTAAGATCTTTATCTAGCAAAAGGCACAGCTCAAGAAGATTGAGGAGTGGTTCATCATCAAAGCAATTAGACAGGACTGAGAGTTTCTCATTATATGAACTAGCCACTGTTACCAACAACTTCTCAGTGGATAATAAGATAGGTGCTGGTAGCTTTGGCAGTGTTTACAAAGGGAAGTTACCAGATGGTCGTGAAGTGGCCATTAAAAGAGGAGATACCAGCACTAAGAAGAAGAAATTTCAAGAGAAAGAAATTGCTTTTGATTCTGAATTGGCATTGTTGTCAAGGCTTCACCACAAGCATTTGGTGAGGCTAATTGGGTTTTGTGAGGAGAATGATGAGAGGGTTTTGGTTTATGAGTACATGAGCAATGGATCACTCCATGATCATTTGCATGACAAGAATAATATTGAGAAAAGTAGCAGCATTTTGAATTCTTGGAAGATGAGAATCAAAATTGCATTAGATGCTGCTAGGGGAATTGAGTACATTCACAACTATGCAGTGCCACCCATTATTCACAGAGATATCAAGTCCTCAAATATACTTTTAGATTCAAATTGGAATGCTAGAGTTTCTGATTTTGGATTGTCCCTAATTTGGCCTGAAACTGAGCAAGAATTGATGTCCACAAAAGCAGTTGGAACAGTTGGATACATAGACCCTGAGTACTACGTCTTGAATGTACTAACCACAAAAAGTGATGTTTATGGTTTAGGAGTGGTTATGTTGGAGCTTCTAACAGGAAAAAGAGCAGTGTTCAAAACTGAAGATGGATCAAGTCCTATTGGAGTAGTGGAATATGCAGGGCCAAAGATAGCATCAGGAGAGCTATGGAATGTGTTGGATCACAGAGTTGGACAACCAGAAGTAAATGAGGTTGAGTCTCTTGAACTCATGGCTTACACTGCTATGCATTGTGTGAACTTGGAGGGGAAAGAGAGGCCTGACATGACTAACATTGTTGCTAACTTGGAGAGGGCATTGGCTTTTGTTGAGGGCAGCCCTGGTAACCTCTCTGTGTCTTTCTCTGCCCCTCTTTAA 2388 0.4271 MTPTTSPFSLAFSFAAIFTITAVNGFGTAATTAVIYGTGTVCGIVSDEPHQLIKCYQNGKHFPVIIPNVSFRAISGGRSFFCGLRSGGYTLHCWDTSAPTLVFRPKRLFHSEVVQLSDVAVGDAQVCARELNSGVVRCWRGGGGKGFEFPSPGEGLRFRSITSGCGFSCGILKENNKVWCWGEGGNGVEIQRQFGNLSMSTLVAGVSHVCGLTLNGVLVCRGNNGSGQLGVPFSSVSVFSTLALGADFTCAIRQRNGLVVCWGGGARKFEFDSNVIQGVSFESIVAGLDFVCGLTTRNFSVICWGPGWSSKLHLPCDIPFGMVLPGPCVKDASCSSCGMYPNSDVLCHGSGSICYSCQTEVPLAVPLVPKQQQSSSAEDKDSKELLAFLIVGSVGAFAGLCTILYFLWIGARRFFKKRVDHSVQPTSDESDAYVDIIPMPNLGSNGTTLRSLSSKRHSSRRLRSGSSSKQLDRTESFSLYELATVTNNFSVDNKIGAGSFGSVYKGKLPDGREVAIKRGDTSTKKKKFQEKEIAFDSELALLSRLHHKHLVRLIGFCEENDERVLVYEYMSNGSLHDHLHDKNNIEKSSSILNSWKMRIKIALDAARGIEYIHNYAVPPIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETEQELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVMLELLTGKRAVFKTEDGSSPIGVVEYAGPKIASGELWNVLDHRVGQPEVNEVESLELMAYTAMHCVNLEGKERPDMTNIVANLERALAFVEGSPGNLSVSFSAPL* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02420 795 Gene3D - 197 382 IPR009091 -
Rops11g02420 795 Gene3D Phosphorylase Kinase; domain 1 449 569 - -
Rops11g02420 795 Gene3D - 45 196 IPR009091 -
Rops11g02420 795 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 782 IPR044815 GO:0004674
Rops11g02420 795 CDD STKc_IRAK 495 775 - -
Rops11g02420 795 ProSiteProfiles Protein kinase domain profile. 489 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02420 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Rops11g02420 795 MobiDBLite consensus disorder prediction 445 469 - -
Rops11g02420 795 SUPERFAMILY RCC1/BLIP-II 115 351 IPR009091 -
Rops11g02420 795 SUPERFAMILY Protein kinase-like (PK-like) 466 773 IPR011009 -
Rops11g02420 795 FunFam receptor-like protein kinase FERONIA 451 569 - -
Rops11g02420 795 Gene3D Transferase(Phosphotransferase) domain 1 570 781 - -
Rops11g02420 795 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Rops11g02420 795 FunFam Serine/threonine-protein kinase-like protein CCR4 570 788 - -
Rops11g02420 795 SMART serkin_6 489 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02420 795 Pfam Protein kinase domain 490 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02420 Rops-Chr11 41123683 41126070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02420 4 788 Receptor kinase-like Gene Family AT3G55950 52.393 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Rops11g02420 Pkinase 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02420 - - gmx:100776682 1171.76