Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02412 ATGAAGTTCTCAACTTCTTCTCATGCATCCCCATCTTCATCATCTACCATAACTATGTGCAACTCAAAAAGCACCAATGCAGGGTGTTTCACAGCCATCTTGCGCAAGATTCTTTGCTCTTGTAGCCTCCCAAAAGAACCTTCAGATCAAATTAGAGATCTTGATTCATCAAATTCAATGGGGAGTGAAAAAGATCAAAACTTGAAGGCTAAGCAGAATCCTGAGGCTACTACTATCACCACTACTACTACAACTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGAATCAATAGAGATACCCTTTGCATCAAGACCAAGTTCACTTTCACGTAGTAGATCCATGAATTCTGTGGACTACTTGGGAGAATGCAATCGAATGGAGGGTCTGCATAAGCAAGTTAAGTCCACATTGTCATTTAGGGAGGTGCCAACTTTTCTTATAATGGAAAATGAGAACTTTTTGGTACTTAGTTTTGAAAATGGAGGCGAGAGTAGAGAATTCAAATCCAAAGGGAGAAAAAGAGAAAAGGGTTGTGCAGAATTGAAGCAGAAAGTGCCAAAAGAGAGAGGTGAGTTAAAGGAAAATAAGAGAGAAAAGGTGTATGATGGGAAGATTTTGATTGAGAAGGGGAAAATGAGCAAAAGGGTGTCTGATATGTCTTGTGGAAATGTTGGAAATGATTGTAAACTTCAAGAAATCACCAACACTTCGCATAGGTTCAAGGCTTCATCTAAAAAGAAGTGTTTTGATTCAGAAGCAGTGAAATTGTCAAAGCCAATGAACCGCGAGGAAGCTGTAATTGGTGAAAAGAAGAAGAGGAGGAAGAAGAAAACAAAGTGTTACAAAGAAAACCAGATAGAAATTGAATGCAAATCAGAAGATTCAAGTCCAGTTTCTGTCCTTGATTTCGAGCGAGAAGCTTGTGGAACAGTTGGCTTGAGTTCAAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGAACTTTCTTCAGCGTTCTGATGGTAACTTGATGATTGATGAGAGGAAGGTTATAGCAACTGAGAACAACAAATATGAAGAATCAAAGAAAAGAGAAAAGCACAGCAAGGAATATATAGATATTTGGGGTGAAGTTTGCAGGCTAGTTCAAGATGAAATGATTGAATCAAATCAGATACATGCATGGATGAACAAACAGGGTGATTTAGAAAGTATATGTGCAGATTTTGAGTCAGAAATTTTTGATCACTTGTTAAGTGAGTTCATGGATCAACTTGTTGGGCACACACAAGTTTGCCACTTCAAAATTTTGTAA 1299 0.3834 MKFSTSSHASPSSSSTITMCNSKSTNAGCFTAILRKILCSCSLPKEPSDQIRDLDSSNSMGSEKDQNLKAKQNPEATTITTTTTTPGIVARLMGLESIEIPFASRPSSLSRSRSMNSVDYLGECNRMEGLHKQVKSTLSFREVPTFLIMENENFLVLSFENGGESREFKSKGRKREKGCAELKQKVPKERGELKENKREKVYDGKILIEKGKMSKRVSDMSCGNVGNDCKLQEITNTSHRFKASSKKKCFDSEAVKLSKPMNREEAVIGEKKKRRKKKTKCYKENQIEIECKSEDSSPVSVLDFEREACGTVGLSSRRKLSPELENDQNFLQRSDGNLMIDERKVIATENNKYEESKKREKHSKEYIDIWGEVCRLVQDEMIESNQIHAWMNKQGDLESICADFESEIFDHLLSEFMDQLVGHTQVCHFKIL* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02412 432 MobiDBLite consensus disorder prediction 53 76 - -
Rops11g02412 432 PANTHER OS05G0128300 PROTEIN 14 423 - -
Rops11g02412 432 MobiDBLite consensus disorder prediction 47 76 - -
Rops11g02412 432 Coils Coil 179 199 - -
Rops11g02412 432 Pfam DUF761-associated sequence motif 84 98 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02412 Rops-Chr11 40994490 40995948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02412 22 426 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 27.536 6.62e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02412 - - gmx:102660067 529.635