Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02390 ATGGATATGGAATTCAAGAAGTTCAGAATCAGAGGCTATGAAGGGCAATCTGATAGAGCTCAAGTGGAAGATCTTGAGAGAAGATGCGAGGTAGGACCAGCAGAAAGCGTGTTTCTCTTCACAGACACTATGGGTGACCCCATTTGTAGGATTCGAAACAGTCCCATGTATATGATGCTGGTGGCAGAGTTGGACAATGAATTGGTCGGTGTGATTCAAGGCTCTATAAAAGTGGTCACAGTTCAAGGTCATCCTCCAAAGGATTTGGCTAAGGTGGGGTATGTCCTTGGCTTAAGGGTTGTTCCTCATCATCGTAGAAAAGGGATTGGTTCAAGCCTAGTTCGAAGGTTAGAAGAATGGTTCACTTCTAATGATGTGGACTATGCATACATGGCCACAGAGAAAGACAACCATGCCTCGGTTAGTCTCTTCATGGACAAGTTTGGGTACACAAAGTTTAGGACTCCAGCTATTCTTGTTAACCCAGTGAATCATCACTCATTGCAAATCTCATCCAACATTGAGATAGCAAGGTTGAAGGTTGAACAAGCTGAGTCACTCTATAGAAGATTCATGGGGTCCACTGAGTTTTTTCCTAATGACATAGGCAATATACTTAGGAACAAGCTAAGTTTGGGGACTTGGGTGGCCTATTTCAAAGGAAGTATTGCTTGGGGTGATTTTGGGACAGATGGACAAGTCCCTAATAGTTGGGCTATGCTTAGTGTATGGAATAGTGGGGAGATATTCAAGTTGAGGCTAGGGAAAGCACCTTTATGTTGCTTGCTATATACAAAGAGTTGGTGCTTGATTGATAAGATTTTCCCATGCTTGAAATTGCCTACCGTACCTGATTTCTTCAATCCATTTGGGTTCTATTTCATGTATGGGGTGTATCATGAAGGGCCATTCTCTGGGAAGTTGGTGAGGGCCTTGTGTCAATTTGTACACAACATGGCTGCAGGGTCCAAGGATGAGAATTGCAAGATCATTGTGACTGAAGTTGGAGGAAGAGATGAGCTCAATCATCACATTCCACATTGGAAATTGCTCTCATGCCCAGAGGACTTGTGGTGCATAAAGGCATTGAAAAATGAAGGGACAAACACGTTCCATGAATTAACCAAAACCCCACCAACAAGAGCTCTTTTTGTAGACCCAAGAGAGGTTTAA 1173 0.4314 MDMEFKKFRIRGYEGQSDRAQVEDLERRCEVGPAESVFLFTDTMGDPICRIRNSPMYMMLVAELDNELVGVIQGSIKVVTVQGHPPKDLAKVGYVLGLRVVPHHRRKGIGSSLVRRLEEWFTSNDVDYAYMATEKDNHASVSLFMDKFGYTKFRTPAILVNPVNHHSLQISSNIEIARLKVEQAESLYRRFMGSTEFFPNDIGNILRNKLSLGTWVAYFKGSIAWGDFGTDGQVPNSWAMLSVWNSGEIFKLRLGKAPLCCLLYTKSWCLIDKIFPCLKLPTVPDFFNPFGFYFMYGVYHEGPFSGKLVRALCQFVHNMAAGSKDENCKIIVTEVGGRDELNHHIPHWKLLSCPEDLWCIKALKNEGTNTFHELTKTPPTRALFVDPREV* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02390 390 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 390 - -
Rops11g02390 390 CDD NAT_SF 59 130 - -
Rops11g02390 390 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 164 IPR000182 GO:0016747
Rops11g02390 390 Pfam Acetyltransferase (GNAT) family 49 150 IPR000182 GO:0016747
Rops11g02390 390 Gene3D - 16 157 - -
Rops11g02390 390 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 17 154 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02390 Rops-Chr11 40478159 40480270 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops11g02390 Acetyltransf_1 3.6e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02390 - - gmx:100799507 739.954