Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02380 ATGGAAGAAGCGTGGAGATTAATGACTCGATTAACGTTCTGCCGCATTGTGGTGTTCGTTGTGATGGTGTGTCTATTCCCGTTGAGCATGAAACCTGGTCAGTGTTTGACTCTGTACAGCGAAGGGTTGGCGCTGCAAAAGATGAGGGAGAGGGTTGTGAGAGACCCATTAGGGGCTTTATCCAATTGGAATGGTGAAGAAGGAGCCATTGATCCGTGCTCATGGTTTGGAGTAGAGTGCTCCAATGGCAATGTTGTCGCCTTGAATTTGAAAGATCTATGTCTTCATGGAACACTAGCACCCGAAATTGGGAAGCTGGTTCACATAAAATCAATCATTTTGCGCAACAATTCTTTCTTTGGAGACATCCCTAAGGAGATACTACAATTAGAGGAACTTGAAGTTCTTGACTTGGGATATAACAACTTCAGTGGACCATTTCCATCAGATGACCTTGGCAGCATTCCATCCCTGACCACCCTTTTATTGGACAACAATGACTATTTAGACATCTTAAATCCAGAAGTGTATAAGCTCAAGATGATTTCTGAGTTGCATGTAAATGAAGAACAACTAACTGGTGCCATCACTAGTGAAACAAGTGTTGACATATTTAATTTCTGGCACATTAGCCAACAAGAGGATATAGCACACAAGAGGAAACTTCTCCAAGCAGCAAAAGCTGCTAACTCACCCAAAACTAAGAGGGATGATAACAAAGGGACTCTTTCACCATCACCATCACCTTTTTCCTCTTCATCATCACCATTTTCTGAGCCTTTCTCACCATCAGAAAGTCCCTCAGATTCTCCAGAAGTTTCCCCTTCACCATCTCCCTCTCCCTCCGGTATCTTTTTCACCCCTTCACCCTCACCTTCACCTGTGGTAGCACCAACTCCAGACATACCACCAGCAAATCCACCTGCTGTTGTGTCCACACCACCACATTCTAACTGGGTTTCAACACCTTCCCCGGTTCCATCTTCAAACCAAGGGAATTCAAACAGTTCAAACACAAAACATTCTGTGATTATTTGGTCCACAGTTGGGGGCTTTTCCTTCCTGGTTTTGGTGTCAGTCACTGTTTTTATTTGCTTCAGAAGTAGTAAAGTTGTAACTGTAAAACCTTGGGCCACCGGGTTGAGTGGCCAGCTGCAGAAAGCATTTGTAACAGGTGTTCCAAGTCTGAAACGAACAGAACTTGAAGTAGCTTGTGAAGATTTCAGCAACATTATTGGTTCTCTTCCAGATGGAACTATTTATAAGGGGACCCTTTCTAGTGGAGTTGAGATAGCTGTAGCAGCCTCTGCGGTGACTTTATCCCAAAACTGGTCAAAAAATATGGAAGCTCAATTTCGAAAGCAGGTAGAGATGTTATCAAGGGTGAACCATAAGAATTTTGTAAATCTTATTGGGTATTGTGAAGCGAATAAGCCATTCACAAGGATGATGGTTTTTGAGTATGCTCCAAATGGAACGCTATTTGAGCATCTACACGTAAGAGAAGCAGAACAACTAGATTGGGGAATGAGAATGAGGATAGCTATGGGAATAGCCTACTGTCTGGAACACTTGCATCAGTTGACACCACCCATTGCCCACAGAAACCTGTTATCTTCCTCTATATGCCTGACTGAAGATTATGCTGCTAAATTATCAGACCTTAGTGTATGGACTGACATAGTATCTACAAAGAAAGGTTCCGAAGCCACACAGCTCTTGGAAACAACTTCAGCATATATAAAGGGCAATGTTTATAGCTTTGGAGTAATATTGTTTGAGTTGATAACGGGGAGAATTCCCTTTGCAGTGGACAATGGCTTAGTTGCAGATTGGGCAGCAGAATATATAAGGGGGCAACCCTTGAGAGACTTGGTGGATACAAGTTTGAATTCTTTGCATGCAAATGAAATTGAGAAATGGTCAGAAGTGATTAATGACTGTGTACATCCAGATCCAGAAAAAAGGCCAACTATGAGAGAGGTTGCAGCCAAGTTGAAGGAAATAACTGCTGTGGGACCTGATGGAGCAACTCCTAAGCCTTCCCCTCTTTGGTGGGCAGAATTAGAAATTCTCACCGACTTAAGTTCAGACATTAATCCATAA 2106 0.4274 MEEAWRLMTRLTFCRIVVFVVMVCLFPLSMKPGQCLTLYSEGLALQKMRERVVRDPLGALSNWNGEEGAIDPCSWFGVECSNGNVVALNLKDLCLHGTLAPEIGKLVHIKSIILRNNSFFGDIPKEILQLEELEVLDLGYNNFSGPFPSDDLGSIPSLTTLLLDNNDYLDILNPEVYKLKMISELHVNEEQLTGAITSETSVDIFNFWHISQQEDIAHKRKLLQAAKAANSPKTKRDDNKGTLSPSPSPFSSSSSPFSEPFSPSESPSDSPEVSPSPSPSPSGIFFTPSPSPSPVVAPTPDIPPANPPAVVSTPPHSNWVSTPSPVPSSNQGNSNSSNTKHSVIIWSTVGGFSFLVLVSVTVFICFRSSKVVTVKPWATGLSGQLQKAFVTGVPSLKRTELEVACEDFSNIIGSLPDGTIYKGTLSSGVEIAVAASAVTLSQNWSKNMEAQFRKQVEMLSRVNHKNFVNLIGYCEANKPFTRMMVFEYAPNGTLFEHLHVREAEQLDWGMRMRIAMGIAYCLEHLHQLTPPIAHRNLLSSSICLTEDYAAKLSDLSVWTDIVSTKKGSEATQLLETTSAYIKGNVYSFGVILFELITGRIPFAVDNGLVADWAAEYIRGQPLRDLVDTSLNSLHANEIEKWSEVINDCVHPDPEKRPTMREVAAKLKEITAVGPDGATPKPSPLWWAELEILTDLSSDINP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02380 701 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Rops11g02380 701 SUPERFAMILY Protein kinase-like (PK-like) 389 666 IPR011009 -
Rops11g02380 701 MobiDBLite consensus disorder prediction 270 311 - -
Rops11g02380 701 Gene3D Ribonuclease Inhibitor 39 224 IPR032675 -
Rops11g02380 701 MobiDBLite consensus disorder prediction 241 269 - -
Rops11g02380 701 Gene3D Transferase(Phosphotransferase) domain 1 489 673 - -
Rops11g02380 701 FunFam Nuclear pore complex protein NUP107 39 198 - -
Rops11g02380 701 Gene3D Phosphorylase Kinase; domain 1 382 488 - -
Rops11g02380 701 FunFam Inactive receptor-like serine/threonine-protein kinase 380 488 - -
Rops11g02380 701 Pfam Leucine rich repeat N-terminal domain 40 81 IPR013210 -
Rops11g02380 701 PANTHER PROTEIN MALE DISCOVERER 2 18 692 - -
Rops11g02380 701 SUPERFAMILY L domain-like 43 199 - -
Rops11g02380 701 ProSiteProfiles Protein kinase domain profile. 406 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02380 701 MobiDBLite consensus disorder prediction 312 337 - -
Rops11g02380 701 Pfam Protein tyrosine and serine/threonine kinase 410 666 IPR001245 GO:0004672|GO:0006468
Rops11g02380 701 MobiDBLite consensus disorder prediction 224 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02380 Rops-Chr11 40017149 40022452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02380 386 669 Receptor kinase-like Gene Family AT4G31110 34.314 8.84e-40 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Rops11g02380 PK_Tyr_Ser-Thr 1.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02380 - - gmx:100801161 978.778