Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02378 ATGGGGGGCACCGGTAAAACTACATTGGCAAAAGAAGTGGGCAAGGAACTTAAGCAAGTGGGGCGATTCACTCGAGTTATCATTACTACAGTGTCATTTACTCCTGATATAAAAAAGATTCAAGATGATATTGCAGGACCATTAGGATTGAAATGGGATGACTGTACTAACTCGGAGCGACCAGCAAAATTGTGGAATAGATTAACCAATGGTGAGAAAATTCTTCTCATATTGGATGATGTGTGGGGTCCTCTCAATTTTGAAGAAATTGGGATTCCATCTAGTGACAATTGCCAAGGTTGCAAGGTTCTTTTAACAACACGGAAATTACAGGTATGCAACCAAATGGAATCTGGGAGGACAATTGATTTACAGCTTTTACCTGAGGAAGAAGCAAGGATCATGTTCGAAAAGCATGCTGGTACTTCCTGTGAAAGTTTGCTCCAAAAGGGGCATGAAATTGTAAAGGAATGTAAAGGATTACCAGTTGCAATTGCAATAATCGGTAGTAGTTTAAAGGGGTCACGAAGTCTAGAAGAGTGGGAAGTGGCCTTAAACTCCTTGCAAAATCATATGCCCACGGATGAAAAGGATGCTGATGAAAATTTGGTTGCTATTTATAAAAGTTTGAAGTATAGCTTTGATTATATGAAGGATGAAAAAGCCAGAGGACTATTCCTCTTATGTTCTGTGTTTCGAGAAGATGAACGAATTTCTATTGGAATTTTAACCAAGTATGGCATAGGAGGAGGCCTCTTTGGGGAAAATTATGACAAATACAATGATGCTAGAAGGGAAGTAGTTGTGGCCAAAAACAAACTCATAGATTCATGTTTATTATTGAAGGATGTGGAAGGAAGTGTGAAAATGCATGACTTGGTACGTGATGCGGCCAAATGGATAGGGAACAATTGCATTCAAGAAGTAAATTTCTCTAATAACAAAAGTCAAAAGGTATTGGTTGAAAGGGGGAAGAATATTGAATATTTGTTATGCCACGGTAAAGGCATGGATGTGTTCTCTATGGGTTTTGATGGTTCCAAACTTGAGATTCTAATTGTGTCTATCGATGAAACCAACTCTATGGAAATCCCAAATTCATTCTTCCAAAACATGACAAGGCTTCGTGTGTTCCATTTATTAAATAACACCAGGAGTTGGGAAATGCAGTCAGCTCAATCTTTACCTCAATCAATTCAATCATTGACGAACATTCGATCTCTATTGCTTGAAAGCTTCAAATTAGGTGACATGTCCATTCTGGGAAACCTTCGAAGTCTAGAAACTGTTGACTTAATTCGTTGTTCAGATGTTGAGTTGCCAGGTGAAATTGCACAACTGAAGAAACTTAGACTATTGAACTTGGTTGATTGTGAATTTACGAGTGAATCAAGTAATAATACCCTTGAAGTGATTGGAAGATGCTCATCACTAGAAGAATTGTATCTCATTAATAATGATGGTTTCCTTGAAGATAGTGTAGCGATTCATCAAAGAATAACCCTCCCGGCATTGCAAAGATATCATTTAGTGAGAGGTTATGATGAAATAATAAATGATTCGGTATCAAAATGTGTGTCTTTCCCAAAGATTGAAGCTTTTGTTTCACAAGCAACATTCAAGTTTATGGTGCAAACAGCAGAGATTCTTGGGCTAGAAGAAATTCAAGGGGGATGGAGAAATCTCATGCCTGAGATCGTTCCAATAGATAAAGATATGAATGATTTGAAAAAGCTTTATTTGAAATCTTGTTCACAACTACAATGCCTCATTGAAACTCATTCTCACGAACAGAAGGTATTCGACAAGTTGGTTGTATTAGAACTTTTCAAAATGGAAAATTTGGAAGAACTATGCAATGGACCCCTTCCCTCTGACTTTCTTAAGAGTTTAGAGAGGCTAACTATTCATGACTGTAATTTGCGAAGCAACCTTTTTATGAGAAAGCTAAGCCTCTACAGTCTTAAAACCATCGAACTGTGGAAATGTCAGGAGTTGGTATCCCTATTTCAACTATCGACTTCTCGAAGCCTAAAGTTGTTGGAGGTATTGAAAATAAATTACTGTGAGAAATTGGAAAACATAATAATAGATGATGTTGGTGAAAAAATAGCTAACAAAGATAACAAGAGTCGTGGCTCAATGTTTCCAAATTTGAAAACTCTTGAAATCATATTATGTCCTCTATTAGAGCATAAACATGACAAAGATTTGCATCAAGAGGTAAAGGATGTCCTACTTGGTTCTCTGAAAGGAATGCAGCTCTATGACTTGCCAAATTTCATCGACATTTTCCCAGAATGTGATCATCCTGTGTGCTCATCCATGAAAAGGTCATCTTCCAAAGATGGGTCAAAGGCACAATTACAATCAGACCCCATCAAATGCAATATATTTCCTTGGAAATATAGACACAAATTGAGGAGTAGCACAAGTACTAAAATACCATTAGATCAACCGCAAGACTGCTCAATCCCGTCGGCACCAGACTTACACTATCCTTACCTTTGGGAACCTCCTCAATGTCTTTTCAAACAATCAAACATCTTGAACAATATTACATGGATTGAGCTTTCCAATGTCTCGAATATAAAATCGGTGTTTACCCTGCCTATTGCTCAAAAATTGTTGTTGGAAAACTTGACGATTGAGAAATGTGGTGAATTGAAGCACATAATATCAGGCAGTGGTGGCAATAACGGGAAAGATGTCTTCCCAAGGTTAAAAATGCTCAACGTGCAACAATGTGAGCAATTGCAATATATATTTGGACGCTACTCTCATCATCTTCAAAACCACAATGAGATGCACCTTCATCTTCCAGCATTGAATCGTCTCTATCTTTCCTGTCTGCCAAATTTCATCGGCATGTGTCCTGAAAACTATTACACAACATTGCCAACTTTGACAGAATTTGCACTCCACGGATGTGCCAAGTTTGCGATTAAATATTTCATCAATCATTTGTATTCAAGACATATTGAGGGTTTGAGTGGGAATGAGTCCAAAGCAGAAAATATTTTTTGTTTCGATGAAATGATTGAACAACAAATGAACTTAGGATTACAAACAATTGAGTTGGGTGATATGCCTCAGATGACGGATCTTTTTGTGGGTCCCAAAAATTCTTTTGTCCTCCAAAACCTTCTAAGCATAGAGATTGTGCGATGTGAAAAATTAGAAGTAATCTTTTCTGGTTCTATTTCAAGATGTCTACCACAGTTGCATAATCTGATAATACAAGAATGTAAAGAATTGAAGCAAATTGTTGAAGAGGAAATGGAGGATAAAAAAATGTCAAATTTTCTTTCTCCAAAGACATGCTTCCCAAAGTTACGAACACTTGAAGTCAAAGATTGCAATAAGTTGAAGTGTGTTTTTCCTACCTCTGTATATGAAGAGCTTCCCAAGCTAAAAGTTCTGATAATAAATGAAGCATATGAGTTAAAGGAAGTATTCGGAGGTGAAGGTGATCACAAAGTTGAGATTCCAAATCTAATATTGGTAGCATTTGCTGAACTACCAAGCCTCTGCCTAGGGAATCAATTTCAGAATGTAGTCCATCGTATGGTGCTTAATTGTCCGAAACTCTCGTTGACTTCAACAATAACTCTCGCTAGCTTCGATATATTTAGATTTTCTTACTCAGAAATTAAAATGGTGTTGCGTTTGAAGAATCTATACAATATGTATACACGCAAAATTGATATCCAAGACACTAGCAATGAAAATCCAAATATCGAAACTACTGAAGATCAAGCGGCATCGGGATATGAGTTGACTTCTTCACAGGTCAATACCAATCATTCTATTCAAGCTAGCACAGCTGAAGACAATCAACAAGAAAATGGCATTGAATCAAACAAGTCAATTTTTGTGGAGACAACAACTAAACAGACACCAGAGGCAGTGCAGGAGTTTTTTGAAAATGTTTCTAGTTTAGAGATACCATCAATATCAAATTTTTCACCAACAAATTCAGAAGTAATTAGAGAGGAGCCATGTCCAAGTCCCATAGATATTCCTATTCATAAAACACAGTCACATGAGTTGTTAGATCAACAATCAATGGGTGAACCATGTTTGATGGACCAACAACAACCACTTATAGAAGTTGATATTACCTATAAAATTCCTCAGGAAAATAATAATCTAAATGAAACAGAGGACCAAAATATTCAAGAGGATTTTAAGTCAAAGAAAATTGCTACAGCAATTATGTCCGTTGATTCAGAAACTAGGCATGTGCCACCTATACCATTACATGCTCCTCAGCAAAAGGATATTAAAATAAATGTTGAGGAAGGAACTACATCAACTAATATGAAGATACCTACCTCATCAACTCATTTAGAATCAGTTAGTTTACAAGAAGATGGTGATAGCAAAAAAACCACACCTTCCTTTTCAGCTATCAATGTAGACTCTCAGAAAACTACTAAGACTTATGCTCTAGAAGCTTCAAAATCTAAGCCCTCTCCTTGCATCCCTTCTCTTGATGCATCTCAGTCACCTTTAATGCCATTTGAAGGGAACTCTTCTCAAATTGTGGAGGATTTTGCTTCTATCATCGCAAGTGAGCTTGGGCAACTGGTTTCCAAGAAGCATTTGGCCTCAGAGAACTTATCATTGTTGACTGATTTCCTTATGAAACATCCTTCTGTTCGTTTAACAAACAAGTCATTGAGTAATAGATACAAAGGTTTTGCCTACAACTGTCTAGCTGAGCTACTGAAATTCCTCCAAACCCATAGTGTGTTGGATGTGTCAGGGTCAAGCCACTCCAATTTTATGGATTTATTACAAGATGTGTGCAGTTTTGCTTTTCATAAGGATTGGTTGGATGGTGTTGAAAGACGTGCCTTATTTCCTAGTTTACAAGTTTCTCAAGATGCATTGCAAAAACTATTAGATTCCAAGCAACAGGTTACCAAGGAAATTGAAATGTTGCGTTTGAATATAGGCATTTTGACTCAGCATGTGGAAGATCTTAAGCATCAATTGACATCCTCTGAAGCTGTCTTGGAGAGTATCATTCAAGAGGAGGCACAAGTTTCAGAAGCTTGGGTTGCTTTAAGCGCGCCACTTGGCTATTAG 5097 0.372 MGGTGKTTLAKEVGKELKQVGRFTRVIITTVSFTPDIKKIQDDIAGPLGLKWDDCTNSERPAKLWNRLTNGEKILLILDDVWGPLNFEEIGIPSSDNCQGCKVLLTTRKLQVCNQMESGRTIDLQLLPEEEARIMFEKHAGTSCESLLQKGHEIVKECKGLPVAIAIIGSSLKGSRSLEEWEVALNSLQNHMPTDEKDADENLVAIYKSLKYSFDYMKDEKARGLFLLCSVFREDERISIGILTKYGIGGGLFGENYDKYNDARREVVVAKNKLIDSCLLLKDVEGSVKMHDLVRDAAKWIGNNCIQEVNFSNNKSQKVLVERGKNIEYLLCHGKGMDVFSMGFDGSKLEILIVSIDETNSMEIPNSFFQNMTRLRVFHLLNNTRSWEMQSAQSLPQSIQSLTNIRSLLLESFKLGDMSILGNLRSLETVDLIRCSDVELPGEIAQLKKLRLLNLVDCEFTSESSNNTLEVIGRCSSLEELYLINNDGFLEDSVAIHQRITLPALQRYHLVRGYDEIINDSVSKCVSFPKIEAFVSQATFKFMVQTAEILGLEEIQGGWRNLMPEIVPIDKDMNDLKKLYLKSCSQLQCLIETHSHEQKVFDKLVVLELFKMENLEELCNGPLPSDFLKSLERLTIHDCNLRSNLFMRKLSLYSLKTIELWKCQELVSLFQLSTSRSLKLLEVLKINYCEKLENIIIDDVGEKIANKDNKSRGSMFPNLKTLEIILCPLLEHKHDKDLHQEVKDVLLGSLKGMQLYDLPNFIDIFPECDHPVCSSMKRSSSKDGSKAQLQSDPIKCNIFPWKYRHKLRSSTSTKIPLDQPQDCSIPSAPDLHYPYLWEPPQCLFKQSNILNNITWIELSNVSNIKSVFTLPIAQKLLLENLTIEKCGELKHIISGSGGNNGKDVFPRLKMLNVQQCEQLQYIFGRYSHHLQNHNEMHLHLPALNRLYLSCLPNFIGMCPENYYTTLPTLTEFALHGCAKFAIKYFINHLYSRHIEGLSGNESKAENIFCFDEMIEQQMNLGLQTIELGDMPQMTDLFVGPKNSFVLQNLLSIEIVRCEKLEVIFSGSISRCLPQLHNLIIQECKELKQIVEEEMEDKKMSNFLSPKTCFPKLRTLEVKDCNKLKCVFPTSVYEELPKLKVLIINEAYELKEVFGGEGDHKVEIPNLILVAFAELPSLCLGNQFQNVVHRMVLNCPKLSLTSTITLASFDIFRFSYSEIKMVLRLKNLYNMYTRKIDIQDTSNENPNIETTEDQAASGYELTSSQVNTNHSIQASTAEDNQQENGIESNKSIFVETTTKQTPEAVQEFFENVSSLEIPSISNFSPTNSEVIREEPCPSPIDIPIHKTQSHELLDQQSMGEPCLMDQQQPLIEVDITYKIPQENNNLNETEDQNIQEDFKSKKIATAIMSVDSETRHVPPIPLHAPQQKDIKINVEEGTTSTNMKIPTSSTHLESVSLQEDGDSKKTTPSFSAINVDSQKTTKTYALEASKSKPSPCIPSLDASQSPLMPFEGNSSQIVEDFASIIASELGQLVSKKHLASENLSLLTDFLMKHPSVRLTNKSLSNRYKGFAYNCLAELLKFLQTHSVLDVSGSSHSNFMDLLQDVCSFAFHKDWLDGVERRALFPSLQVSQDALQKLLDSKQQVTKEIEMLRLNIGILTQHVEDLKHQLTSSEAVLESIIQEEAQVSEAWVALSAPLGY* 1699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02378 1698 Gene3D - 127 217 IPR042197 -
Rops11g02378 1698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 229 IPR027417 -
Rops11g02378 1698 MobiDBLite consensus disorder prediction 1437 1467 - -
Rops11g02378 1698 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 902 1167 - -
Rops11g02378 1698 Gene3D - 1 122 IPR027417 -
Rops11g02378 1698 Pfam NB-ARC domain 1 215 IPR002182 GO:0043531
Rops11g02378 1698 Gene3D Ribonuclease Inhibitor 288 524 IPR032675 -
Rops11g02378 1698 Gene3D Ribonuclease Inhibitor 550 745 IPR032675 -
Rops11g02378 1698 Gene3D Ribonuclease Inhibitor 938 1155 IPR032675 -
Rops11g02378 1698 SUPERFAMILY L domain-like 289 735 - -
Rops11g02378 1698 SUPERFAMILY RNI-like 846 1147 - -
Rops11g02378 1698 Coils Coil 1080 1100 - -
Rops11g02378 1698 Coils Coil 1633 1653 - -
Rops11g02378 1698 PRINTS Disease resistance protein signature 68 82 - -
Rops11g02378 1698 PRINTS Disease resistance protein signature 422 438 - -
Rops11g02378 1698 PRINTS Disease resistance protein signature 158 172 - -
Rops11g02378 1698 Coils Coil 1661 1681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02378 Rops-Chr11 39998765 40011038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02378 1 458 WRKY Transcription Factor Family AT5G45050 22.694 2.21e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02378 - - aprc:113851230 1625.53