Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02375 ATGGCTGCTGAGCATGGTGATAGAGGGTCCTCCATCTCCACACCCCTTCTTCTTGGTGATGAAAAAGTGCAACAAGTGAATAGTTCAAATGGGGTTGTGGCCAAAACTGGTGATCTACACACAGTTAAAGTGGGCAACGCTTCTTTATTCAAGACTTGTTTTCATCTGGTTAATGCCATCTCAGGAGTTGGTATTGTATCCATGCCTTACGCATTGGCATCTGGGGGATGGTTAAGCTTATTGCTACTATTTATGATCGCCATTTCTTGCTGCTACACTGGCACATTGGTCAAAAGATGCATGGATTTGGATCCTGATATTGTGACCTTTTCAGACATAGGTAAACGTGCATTTGGAGACAAGGGGAGGCTAATGGTATCAATCATCATGAATTCTGAGCTCTACCTAGCTGTAACAGGTTTTCTGATTTTAGAGGGAGACAATCTACACAAACTGGCACCAAACATGCAACTTGATCTTGGAGGGTTAACAATTGGTGGTACAGCAGTTTTTACCATAATTGGTGCCCTTGTTATTTTGCCTACTGTTTTGTTTGAAGACCTGAGCTTGCTATCTTATGTCTCTGCTGGTGGGGTTATTGCTTCTTGCATCTTTCTGCTCTGTCTATTCTGTAATGGCACCATTGATGGAACAGGATTTCATGGAAAGGGAACACTTCTCAGATGGAGTGGAATACCTGCTGCTGTTAGTCTATATGCCTTCTGTTATAGTGCTCATCCAATCCTTCCTACTCTATACAATTCAATGAGAGACAAAAGTCATTTCTCCAGTGTCTTGTTTGCATGCTTTTCAGTTTGCACTCTTGGTTATGCTGCAGCAGCTATTTTGGGCTACTTAATGTTTGGAGAAGAGGTTGAATCACAGGTTACTTTGAATCTCCATATAGGCAAGTTGAGTTCACGTGTGGCAATATACACTACCTTGGTCAATCCCATAACCAAATATGCATTGATGCTTACTCCAGTCATAAATGCTATGAAGAATAAGGTTTCATGCCATTACAATAAAAGGCTTACACATATGATTGTTAGTACCTCTTTGCTAATCAGTTCTCTTATTATAGCCGTGACCATTCCCTTATTTGGATACCTCATGTCACTTGTTGGAGCATTACTAAGCGTCACGGCTTCAATTTTAGTGCCATCAGTGTGTTACTTGAAGATTTCAGGAGCTTACAAGAGATTTGGGTATGAAATGATCATCAACTATGCAATAATAGTAATGGGGGTTACTATTGCTGTTGTAGGTACTTACAGATCTCTTGTAGATATATTTCATAATTTGTAA 1308 0.4029 MAAEHGDRGSSISTPLLLGDEKVQQVNSSNGVVAKTGDLHTVKVGNASLFKTCFHLVNAISGVGIVSMPYALASGGWLSLLLLFMIAISCCYTGTLVKRCMDLDPDIVTFSDIGKRAFGDKGRLMVSIIMNSELYLAVTGFLILEGDNLHKLAPNMQLDLGGLTIGGTAVFTIIGALVILPTVLFEDLSLLSYVSAGGVIASCIFLLCLFCNGTIDGTGFHGKGTLLRWSGIPAAVSLYAFCYSAHPILPTLYNSMRDKSHFSSVLFACFSVCTLGYAAAAILGYLMFGEEVESQVTLNLHIGKLSSRVAIYTTLVNPITKYALMLTPVINAMKNKVSCHYNKRLTHMIVSTSLLISSLIIAVTIPLFGYLMSLVGALLSVTASILVPSVCYLKISGAYKRFGYEMIINYAIIVMGVTIAVVGTYRSLVDIFHNL* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02375 435 Pfam Transmembrane amino acid transporter protein 46 426 IPR013057 -
Rops11g02375 435 PANTHER AMINO ACID TRANSPORTER 44 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02375 Rops-Chr11 39941703 39946619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02375 38 431 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.430 1.12e-151 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02375 K15015 - gmx:100804353 669.463