Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02374 ATGAGACCTATTGCTTTCTCTTTGAAAGAGTCTGCTGTTGAAGATAACATTGATTTCAATGAAGATGGTGAAGAAGAGGTTCCTGATTTGGTGGGATCAATGGCAAAACCAGCTCGTCCTTTTTACAATGCTTTTGAGATCATTTCCTCTTTGTCCCATGGCTTTGATCTTAGGAACTTATTTGAGACGAGGAAGAGGTCCCCCTTTATGTTCATATCAAAGTTTTCAACTTCTGCAGTGTTGGCAAAGCTTAAGGGTGTGGCACGGAGGCTGAGACAAAAAGGTCGACTTGAGAGGTCCCAAAAACCTCGTTTGTGTGGGGTAAAATTGATATTTTGA 339 0.413 MRPIAFSLKESAVEDNIDFNEDGEEEVPDLVGSMAKPARPFYNAFEIISSLSHGFDLRNLFETRKRSPFMFISKFSTSAVLAKLKGVARRLRQKGRLERSQKPRLCGVKLIF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02374 112 Pfam NAF domain 41 92 IPR004041 GO:0007165
Rops11g02374 112 ProSiteProfiles NAF domain profile. 37 62 IPR018451 GO:0007165
Rops11g02374 112 Gene3D Kinase associated domain 1, KA1 40 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02374 Rops-Chr11 39927039 39927377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02374 41 107 CBL-interacting serine-threonine protein kinases AT5G25110 41.791 9.85e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02374 - - lja:Lj3g3v2118210.1 134.035