Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g02369 ATGGCTGCAGCATTGGAGTGTTGGGCAAGACGTGGCAACAACGATGATGACATGGTGGAACAGGTCCTTATGGAGGGTCCAACTTCACAACCCAAAGACTCTTCAATCCTTCATAAGAAGCTTCACAAGCTCACACGCAATGTTTCTGAGGCCATAGCTTCCTTCAAGAACTCCCTTAACCTTAACCTTAACCTTGATTCTTCCAAAACTGACACATGTCGAAACAACCTCGTATGGGGAAACGTTGTTAGCAACCTCACTCAGCTCTACCCTGGTAGCCAGCTACCGGAGAAGCTCGTGTACAACATTCGGAAGCACTATGATTCCTTGCCTCTCAGTTATTCTCAGGCGGGGTTTGATGTGAAAGATGTGTTTCTTCACATCAAGCTGATGGAACAAGCTTTGGAAGATGAGCAGGCTGCGATTTTGATTCAAGAGGAGTGTGATGGTGAGATGCAGCTTCAAGGGTCTTTGTTCAAGTTGACATTTGCTTGCAACTCTCCAATTTCATGGCCTGCAATGTCTAGTGCGTTGGATAGTTCCTCCATTTGCTGCAAGAAGATTCAGATATTTGAGAAGAAAGGTTTCACCCTTGGTATTGTTCTTCTACTTGTTCTGTCTGGTGCTGGGCAAGATAAGTGGGTCAGAACCCGGGTTGAAAGTGCTCTCAAGTTTGCAATGAAGAAACCCAAAGCCAGTGCTGTGAAGCTTCCTTTTGGGCTTTGTGGATGTCAAGAGGAGAATTCCAAGGGGAGAGAGCTTGGAGAGATTGAAGAAGATGGTGGCAATGCATACTGTGGAAATGGATTTGAGAATATGAACCAAAAGATTCAGCTTCAGGTGCCCTTGCCTAGTTCATCTTTTCTTGTATCAGTGGATGAATGGCAGACTATTCAGACAGGTGGGGATGAGATGGAAAAATGGTTGTTGAACTCAGATAGTCTTGAATTTTTAGAACAGATTGGACCCAATTCGTATAAGGGGTCCTACATGCGTAAAAGGGTTGGCATTGAGAAGCTTAGAGGGTGTGACAAAGGGAACTCTTATGAGTTTGACCTCAGGAAAGATCTGCTAGAACTGATGACTTGTGGCCATAAAAATATTTTGCAGTTTTGTGGTGTTTGTGTAGATGACAATCATGGTTTGTGTGTAGTGACGAAATTCATGGAAGGTGGATCTGTTCATGACTTAATATCAAAGAACAAGAAGATTCAGAGCAAAGATATTGTAAGAATTGCAGTTGATGTGGCCGAGGGGATCAAGTTTGTGAATGATCATGGTGTTGCTTACAGAGACCTTAATACACAGAGGATTCTGTTGGATAAGCATGGGAATGCTTGCTTGGGAGATATGGGTTTAGTCACTGCCTGCAAGAGTGTTGGAGAGGCAATGGATTATGAAACTGATGGTTATCGATGGCTAGCTCCAGAGATAATTGCTGGTGACCCAGAGAGTGTCACAGAGACAAGGATGAGTAATGTTTATAGTTTTGGCATGGTAATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCTGCATATTCACCTGTGCAAGCAGCAGTAGGCATTGCTGCTTGTGGCCTTAGACCTGAGATTCCTAAGGATTGCCCTCAAACTCTAAAATCTCTTATGATCAAGTGTTGGAACAACAACCCTTCAAAACGCCCTCAGTTCTCTGAAATTTTAGCAATGTTGCTGAGACCAAACAACAACAATAGGTAA 1722 0.4355 MAAALECWARRGNNDDDMVEQVLMEGPTSQPKDSSILHKKLHKLTRNVSEAIASFKNSLNLNLNLDSSKTDTCRNNLVWGNVVSNLTQLYPGSQLPEKLVYNIRKHYDSLPLSYSQAGFDVKDVFLHIKLMEQALEDEQAAILIQEECDGEMQLQGSLFKLTFACNSPISWPAMSSALDSSSICCKKIQIFEKKGFTLGIVLLLVLSGAGQDKWVRTRVESALKFAMKKPKASAVKLPFGLCGCQEENSKGRELGEIEEDGGNAYCGNGFENMNQKIQLQVPLPSSSFLVSVDEWQTIQTGGDEMEKWLLNSDSLEFLEQIGPNSYKGSYMRKRVGIEKLRGCDKGNSYEFDLRKDLLELMTCGHKNILQFCGVCVDDNHGLCVVTKFMEGGSVHDLISKNKKIQSKDIVRIAVDVAEGIKFVNDHGVAYRDLNTQRILLDKHGNACLGDMGLVTACKSVGEAMDYETDGYRWLAPEIIAGDPESVTETRMSNVYSFGMVIWEMVTGEAAYSAYSPVQAAVGIAACGLRPEIPKDCPQTLKSLMIKCWNNNPSKRPQFSEILAMLLRPNNNNR* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g02369 573 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 205 565 - -
Rops11g02369 573 Pfam Protein tyrosine and serine/threonine kinase 351 564 IPR001245 GO:0004672|GO:0006468
Rops11g02369 573 PRINTS Tyrosine kinase catalytic domain signature 536 558 IPR001245 GO:0004672|GO:0006468
Rops11g02369 573 PRINTS Tyrosine kinase catalytic domain signature 422 440 IPR001245 GO:0004672|GO:0006468
Rops11g02369 573 PRINTS Tyrosine kinase catalytic domain signature 386 399 IPR001245 GO:0004672|GO:0006468
Rops11g02369 573 PRINTS Tyrosine kinase catalytic domain signature 492 514 IPR001245 GO:0004672|GO:0006468
Rops11g02369 573 ProSiteProfiles Protein kinase domain profile. 315 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g02369 573 Gene3D Transferase(Phosphotransferase) domain 1 309 570 - -
Rops11g02369 573 SUPERFAMILY Protein kinase-like (PK-like) 301 565 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g02369 Rops-Chr11 39858210 39861796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g02369 298 565 MAP Kinase Kinase Kinase AT2G17700 33.455 2.05e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Rops11g02369 PK_Tyr_Ser-Thr 5.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g02369 - - gmx:100811417 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g02369 11 39858210 39861796 Rops11g02369 11 39858210 39861796 ECH
Rops11g02369 11 39858210 39861796 Rops9g01250 9 20716380 20720583 PCT